| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is apgM [H]
Identifier: 55980085
GI number: 55980085
Start: 116598
End: 117818
Strand: Direct
Name: apgM [H]
Synonym: TTHA0116
Alternate gene names: 55980085
Gene position: 116598-117818 (Clockwise)
Preceding gene: 55980082
Following gene: 55980086
Centisome position: 6.3
GC content: 67.9
Gene sequence:
>1221_bases ATGGACCTCTTCCCCGTCCTCAAGGAACTCGCCCAGAAGACCCCGAGCAAGATCCTCCTCATCGTCTTGGACGGCGTGGG GGGGCTTCCCTTGGAGCCTGGGGGCCCCACGGAGCTCGAGGCCGCCAAGACGCCCAACCTGGACCGCCTGGCGGAGGAGA GCGCCTTAGGCCTCCTCACCCCCGTCTACCCCGGCCTCGCCCCGGGCTCCGGCCCAGGCCACCTCGCCCTCTTCGGCTAC GACCCCTTCCGCTACGTGGTGGGCCGGGGGGCTTTGAGCGCCTTGGGCCTCGGGGCCGACTTCCGGGAGGGGGACGTGGC CTTAAGGGGGAACTTCGCCACCTTAGACCCTGAGGGCAAGGTGGTGGACCGCAGGGCGGGAAGGCCCCCCACGGAGGAGA ACCAGAGGGTCATCGCCAAACTCAAGGAAGCCATCCCCCGCATAGAGGACGTGGAGGTCCTCTTCTACACGGAAAGCGAG CACCGCTTCCTGGTGATCCTCCGGGGGGAGGGGCTGGAGGACAAGGTGACGGACACCGACCCCCAGAAGACGGGCCTGCC CCCCCTAAAGGCCAAGGCCCTGGACGAGGCCTCGGAGAGGACGGCCAGGCTCGTCAACCTGCTTTCGGAGAGGATCCGGG AGGTCCTCAAGGACGAGCCCCGCATGAACGGGGCCCTCTTCCGGGGGGCCTCCAAGAAGCCAAGCTTCCCCCGGATGCAG GAGGTCTACAAGCTCACCCCCGCCGCCATCGCCAGCTACCCCATGTACAAGGGCCTGGCCAGCCTGGTGGGCATGGAGGT CCTTCCCGTGGAGGGGGAGGGGGACGCCCTGGAGGGGAAGCTCAAGGCCCTAAAGGAGAACTGGGGGCGGTACGACTTCT TCTACTTCCACGTGAAGAAGACGGACGCCATGGGGGAGGACGGGAACTTCCACGGAAAGGTGGAGAAGGTGGAGCTCTTT GACGCCCTCCTCCCCGAGATCCTGGCCCTAGGCCCGGACGTCCTCGCCATCACGGGAGACCACTCCACCCCCGCCCTCCT CAAGGCCCACTCCTGGCACCCCGTCCCCCTCCTCCTGAAGGCCCCCTACCTGCGGGCGGACGAGGCGAGGCGCTTCACGG AGAGGGAGGCCCAAAGGGGAAGCCTCGGCCACCTCCGGGGGGTGGAGCTCATGCCCCTCCTCCTCGCCCACGCGGGGAAG CTCTTGAAGTACGGGGCCTAA
Upstream 100 bases:
>100_bases TGGATGACCTCGAGGTACCACTCGCTGAAGTCCTGGCTCTGGGGGGTTAGGCCCTTCTCCTTCGCCATACCCGCCCATCT TACCCCAGTAAAATGGCCCC
Downstream 100 bases:
>100_bases AATGGGGAGATGATCCGCCACCGCCTGAGCCTCGAGGAGTTCCAGGCCCTCCTGGAGAAGGCCCCAGAGGGGCTTCGCCT GGAGCTCTTGGACGGCGAGG
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLTPVYPGLAPGSGPGHLALFGY DPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESE HRFLVILRGEGLEDKVTDTDPQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELF DALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLKAPYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGK LLKYGA
Sequences:
>Translated_406_residues MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLTPVYPGLAPGSGPGHLALFGY DPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESE HRFLVILRGEGLEDKVTDTDPQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELF DALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLKAPYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGK LLKYGA >Mature_406_residues MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLTPVYPGLAPGSGPGHLALFGY DPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESE HRFLVILRGEGLEDKVTDTDPQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELF DALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLKAPYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGK LLKYGA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR006124 [H]
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 44385; Mature: 44385
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLT CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH PVYPGLAPGSGPGHLALFGYDPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGK HCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCEEEECCEEEECCCCC VVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESEHRFLVILRGEGLEDKVTDTD EECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCC PQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHH EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKK HHHHCCHHHHHHCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEE TDAMGEDGNFHGKVEKVELFDALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEEECCCCCCCCEEE APYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGKLLKYGA CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLT CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH PVYPGLAPGSGPGHLALFGYDPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGK HCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCEEEECCEEEECCCCC VVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESEHRFLVILRGEGLEDKVTDTD EECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCC PQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHH EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKK HHHHCCHHHHHHCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEE TDAMGEDGNFHGKVEKVELFDALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEEECCCCCCCCEEE APYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGKLLKYGA CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA