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The map label for this gene is nqo10

Identifier: 55980062

GI number: 55980062

Start: 92371

End: 92901

Strand: Direct

Name: nqo10

Synonym: TTHA0093

Alternate gene names: 55980062

Gene position: 92371-92901 (Clockwise)

Preceding gene: 55980061

Following gene: 55980063

Centisome position: 4.99

GC content: 68.93

Gene sequence:

>531_bases
ATGAGCCTTCTTGAAGGCCTCGCCCTCTTCCTCCTCCTCCTGAGCGGGGTCCTGGTGGTGACCCTCAGGAACGCCATCCA
CGCCGCCCTGGCCCTGATCCTCAACTTCCTGGTCCTCGCCGGAGTCTACGTGGCCCTGGACGCCCGCTTCCTGGGCTTTA
TCCAGGTCATCGTCTACGCCGGGGCCATCGTGGTCCTCTTCCTCTTCGTCATCATGCTCCTCTTCGCCGCCCAGGGGGAG
ATCGGGTTTGACCCCCTGGTGCGCTCCAGGCCCCTCGCCGCCCTCCTCGCCTTAGGGGTGGCGGGGATCTTGGCCGCGGG
GCTTTGGGGGCTGGACCTCGCCTTCACCCAGGACCTGAAGGGCGGGCTTCCCCAGGCCCTGGGGCCCCTGCTCTACGGCG
ACTGGCTCTTCGTCCTCCTCGCGGTGGGCTTCCTCCTCATGGCCGCCACGGTGGTGGCCGTGGCCCTGGTGGAGCCCGGG
AAGGCCTCGAGGGCCAAGGAGGCGGAGAAGCGGGAGGAGGTGGCGCGGTGA

Upstream 100 bases:

>100_bases
AGGCCAAGCGGACGGGCAAGCCCGTGAAGGTGGGCTACGTGGTGCCCTACGTGCGGCCCGAGCTGGAGGGGTTCAAGGCC
CCCACGGAAGGGGGGAAGCG

Downstream 100 bases:

>100_bases
GCTACCTCCTCACCTCCGCCCTCCTCTTCGCCCTCGGGGTCTACGGGGTCCTCACCCGGAGGACCGCCATCCTGGTCTTC
CTCTCCATTGAGCTCATGCT

Product: NADH-quinone oxidoreductase subunit 10

Products: NA

Alternate protein names: NADH dehydrogenase I chain 10; NDH-1 subunit 10

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVLFLFVIMLLFAAQGE
IGFDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQDLKGGLPQALGPLLYGDWLFVLLAVGFLLMAATVVAVALVEPG
KASRAKEAEKREEVAR

Sequences:

>Translated_176_residues
MSLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVLFLFVIMLLFAAQGE
IGFDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQDLKGGLPQALGPLLYGDWLFVLLAVGFLLMAATVVAVALVEPG
KASRAKEAEKREEVAR
>Mature_175_residues
SLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVLFLFVIMLLFAAQGEI
GFDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQDLKGGLPQALGPLLYGDWLFVLLAVGFLLMAATVVAVALVEPGK
ASRAKEAEKREEVAR

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is menaquinone. Couples the redox reaction to proton translocation (for every

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family

Homologues:

Organism=Escherichia coli, GI1788616, Length=177, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NQO10_THET8 (Q56225)

Other databases:

- EMBL:   U52917
- EMBL:   AP008226
- PIR:   T11907
- RefSeq:   YP_143359.1
- ProteinModelPortal:   Q56225
- STRING:   Q56225
- GeneID:   3169626
- GenomeReviews:   AP008226_GR
- KEGG:   ttj:TTHA0093
- NMPDR:   fig|300852.3.peg.124
- eggNOG:   NOG133509
- HOGENOM:   HBG729722
- OMA:   FIQVIVY
- ProtClustDB:   CLSK738966
- BioCyc:   TTHE300852:TTHA0093-MONOMER
- InterPro:   IPR001457

Pfam domain/function: PF00499 Oxidored_q3

EC number: =1.6.99.5

Molecular weight: Translated: 18552; Mature: 18421

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12e4724c)-; HASH(0x12bbe14c)-; HASH(0x12a6b648)-; HASH(0x1238e480)-; HASH(0x12a71b98)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIVVLFLFVIMLLFAAQGEIGFDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQDLK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGLPQALGPLLYGDWLFVLLAVGFLLMAATVVAVALVEPGKASRAKEAEKREEVAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH
>Mature Secondary Structure 
SLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIVVLFLFVIMLLFAAQGEIGFDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQDLK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGLPQALGPLLYGDWLFVLLAVGFLLMAATVVAVALVEPGKASRAKEAEKREEVAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9020134