Click here to switch to the map view.

The map label for this gene is 55980004

Identifier: 55980004

GI number: 55980004

Start: 36233

End: 37336

Strand: Direct

Name: 55980004

Synonym: TTHA0035

Alternate gene names: NA

Gene position: 36233-37336 (Clockwise)

Preceding gene: 55980003

Following gene: 55980005

Centisome position: 1.96

GC content: 62.77

Gene sequence:

>1104_bases
TTGGCCAGCTGCGCTGGGGGAGCCGTAGGCACCGCGGCCTCCCTCTACCTCGCTCGCTTAGACAACCCCTTCTACCTGGG
TCTGCAACACGCCATCGGTTGGGGTGCCTCCGTCTTAGCCCTCTTCACAGGCTACCTTCTAGATCGGACGGACCGCAAAA
AAGCCCTCAGCTTCGGGCTTCTCTCTGGCAGTCTCCTGCGCTTTCTTTTAGGAACAAGCCTCGGCCTCATTGGTCCATGG
ACCTTTCTCGGCCTTTACCTGGTAGACAACATCCTTGAGCTTCTTCTGGAGGTCCGGGTCCTGGTCCCTAGACTCGTGCC
GCAGGAACGGGAGAAGGCCCATGGGCGTCTTTACACGGCAAGTCTCCTTGCTGACCTTCTCGGCGCCCCCTTAGGCGCCT
TCCTCTTCGTCCAGAATCCCTCCTGGCCCTTTTTCCTCGGGGGCGCGCTAGGCTTTGTGGCCATTCACTTCGCCGCTAGG
CTCCCTCCCATACCGCCTCTTGGAAAAGCCCCCCCGGGGGTGCTGGCTGGCCTGAGGTGGCTGTACCAGGAAGCCTTCTT
TCGTCGGCTAGCCGGAGCGGTCCTTGGAGCCAGCTTCCTCCGGGTCATGCCCTTCGCCCTTCTTCCCCTCTGGTCCCTCC
AAGCCGGGTACGGACCCATAGGGTATGGGCTCCTCAGCACCGCCTTCTCCCTTGGGGGGGCCTTAGGAGGGCTTTTGGCA
GGGAAACTTAAAGGCAAAAGGCCGCAAAGGGTGCTTAGCCTCCTTTTCCTCATGGACGCCGGGGCCGTCCTGGGTTTGCT
CTTCAAGCCTCCCCTTCCCCTGGGCCTGCTCCTCGTGGCCCTCCTGGGGATAAGCGCCATCCTCCTGGGGGTCCAAGAGG
TGGTGCTAAGGCAGGCCCTGGCCCCGGATGCCCTACTGGGCCGGGTAGGGGGTGGAATGAGGTTCCTGAGCGGCTCAGCC
GGGCTTCTGGGGGCACTTTTGGCGGGGATAGTAGGGGGAAAGCTGGGCTTGGAGGAGGTCTATCTGGGAGCGGGGCTTGG
ATTTCTCCTCCTGGCCTTAGCCGCCTGGGGCTTCCTCGGCCAAATTGAGAAGCGGGCCCGGTGA

Upstream 100 bases:

>100_bases
GGAGAAAATGTACGTTTGCTCCTCTGCTGACGGGGTGGTCTGGGAAGTAGAGGGTTTCTTGACTTAGCTGAGGGTGTTCT
TATTAGCCACGATCCTGTTT

Downstream 100 bases:

>100_bases
CCTCCTGGGAGCGTTTTGTGCCTAGCCTTCTTTCTCCTCCTCGGCCCCACGGCCCAGCTAGCCCGTCAAGAGCCCCGCCG
CTAGAGGAGCCGGCCGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MASCAGGAVGTAASLYLARLDNPFYLGLQHAIGWGASVLALFTGYLLDRTDRKKALSFGLLSGSLLRFLLGTSLGLIGPW
TFLGLYLVDNILELLLEVRVLVPRLVPQEREKAHGRLYTASLLADLLGAPLGAFLFVQNPSWPFFLGGALGFVAIHFAAR
LPPIPPLGKAPPGVLAGLRWLYQEAFFRRLAGAVLGASFLRVMPFALLPLWSLQAGYGPIGYGLLSTAFSLGGALGGLLA
GKLKGKRPQRVLSLLFLMDAGAVLGLLFKPPLPLGLLLVALLGISAILLGVQEVVLRQALAPDALLGRVGGGMRFLSGSA
GLLGALLAGIVGGKLGLEEVYLGAGLGFLLLALAAWGFLGQIEKRAR

Sequences:

>Translated_367_residues
MASCAGGAVGTAASLYLARLDNPFYLGLQHAIGWGASVLALFTGYLLDRTDRKKALSFGLLSGSLLRFLLGTSLGLIGPW
TFLGLYLVDNILELLLEVRVLVPRLVPQEREKAHGRLYTASLLADLLGAPLGAFLFVQNPSWPFFLGGALGFVAIHFAAR
LPPIPPLGKAPPGVLAGLRWLYQEAFFRRLAGAVLGASFLRVMPFALLPLWSLQAGYGPIGYGLLSTAFSLGGALGGLLA
GKLKGKRPQRVLSLLFLMDAGAVLGLLFKPPLPLGLLLVALLGISAILLGVQEVVLRQALAPDALLGRVGGGMRFLSGSA
GLLGALLAGIVGGKLGLEEVYLGAGLGFLLLALAAWGFLGQIEKRAR
>Mature_366_residues
ASCAGGAVGTAASLYLARLDNPFYLGLQHAIGWGASVLALFTGYLLDRTDRKKALSFGLLSGSLLRFLLGTSLGLIGPWT
FLGLYLVDNILELLLEVRVLVPRLVPQEREKAHGRLYTASLLADLLGAPLGAFLFVQNPSWPFFLGGALGFVAIHFAARL
PPIPPLGKAPPGVLAGLRWLYQEAFFRRLAGAVLGASFLRVMPFALLPLWSLQAGYGPIGYGLLSTAFSLGGALGGLLAG
KLKGKRPQRVLSLLFLMDAGAVLGLLFKPPLPLGLLLVALLGISAILLGVQEVVLRQALAPDALLGRVGGGMRFLSGSAG
LLGALLAGIVGGKLGLEEVYLGAGLGFLLLALAAWGFLGQIEKRAR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38452; Mature: 38320

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASCAGGAVGTAASLYLARLDNPFYLGLQHAIGWGASVLALFTGYLLDRTDRKKALSFGL
CCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LSGSLLRFLLGTSLGLIGPWTFLGLYLVDNILELLLEVRVLVPRLVPQEREKAHGRLYTA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHH
SLLADLLGAPLGAFLFVQNPSWPFFLGGALGFVAIHFAARLPPIPPLGKAPPGVLAGLRW
HHHHHHHCCCHHHEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LYQEAFFRRLAGAVLGASFLRVMPFALLPLWSLQAGYGPIGYGLLSTAFSLGGALGGLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GKLKGKRPQRVLSLLFLMDAGAVLGLLFKPPLPLGLLLVALLGISAILLGVQEVVLRQAL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APDALLGRVGGGMRFLSGSAGLLGALLAGIVGGKLGLEEVYLGAGLGFLLLALAAWGFLG
CCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
QIEKRAR
HHHHHCC
>Mature Secondary Structure 
ASCAGGAVGTAASLYLARLDNPFYLGLQHAIGWGASVLALFTGYLLDRTDRKKALSFGL
CCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LSGSLLRFLLGTSLGLIGPWTFLGLYLVDNILELLLEVRVLVPRLVPQEREKAHGRLYTA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHH
SLLADLLGAPLGAFLFVQNPSWPFFLGGALGFVAIHFAARLPPIPPLGKAPPGVLAGLRW
HHHHHHHCCCHHHEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LYQEAFFRRLAGAVLGASFLRVMPFALLPLWSLQAGYGPIGYGLLSTAFSLGGALGGLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GKLKGKRPQRVLSLLFLMDAGAVLGLLFKPPLPLGLLLVALLGISAILLGVQEVVLRQAL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
APDALLGRVGGGMRFLSGSAGLLGALLAGIVGGKLGLEEVYLGAGLGFLLLALAAWGFLG
CCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
QIEKRAR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA