Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980003

Identifier: 55980003

GI number: 55980003

Start: 35234

End: 36199

Strand: Direct

Name: 55980003

Synonym: TTHA0034

Alternate gene names: NA

Gene position: 35234-36199 (Clockwise)

Preceding gene: 55980002

Following gene: 55980004

Centisome position: 1.9

GC content: 54.66

Gene sequence:

>966_bases
ATGCTCAAGGAAGTGCAGGAGGCCAAGGTCGGCGGCCGGACGCGGCGGGTCTACGTGAGGCCCTTCGCCTGGGGTTTGAA
GAATCCCTCCCACATGGAGTGGACTCCAGACGGCAGGCTTTTGGTTTCCGAACACACTGCGGGCACTGTTCGGGACATTT
CAAAAGGGGGGGATGCTTCGGAGGCTAAACCTTTGGCGTACAATCTACAGGGTCCCGCTGCTATTCGCCCTACTGAGGAC
GGCAAGGTTCTCGTTGTGGAAACGTGGGGAGGAGCTATCGCGGATATCGCCGGAGGGGGTGATGCAACAAAACTACCTAA
ATTAACCGAAAACCTAAAGGGCCCCTACACCCTAGCCGTGCTGAACCCAGGGAAAAAGGGGGAGACCCTTTTTGTAAGCG
AAAGCTCCTCTTCCTTCATGACACAAATCACCCGTCTAAGTCTAGGCGACCATGAGCGAGAGCCCAAAGCTTTTATCCTA
GACATACCTGCCCGACATGGTGAGCCTGGGTTGACCCCCCCAGAGTCATGGCCCGACAAGTGGGAAAAGTATGCAGCAGC
AGGATGTGTCAAAAATTGGATTGACGATGCTGCTGGAAGGGGCTTCTTCTACCTCGCTGTAGGAAGCCTGGGCCAGATCT
TCCGCATAAATCCAGATGAATTGCCGGAGAAAATTACCTACTCTGAGTTGGTTGCCCATCCGAATGCGTTGGTAGCCTGG
GGGCTTCATCGCCTAGGAGGGATGCGTTTTCATCCCTCATCCGGATTGCTCTTCGCCGTTCAGCCAGAGATGGGAGAAGT
CATTGCTGTAGACCCCGCTCAACCTGGCAATTACCACTTCCAGCCTCCCGTTGTGAGAGGGCTAAGGATGCCTACTTGCG
TAAGGTTCTCTCAGGACTCGGAGAAAATGTACGTTTGCTCCTCTGCTGACGGGGTGGTCTGGGAAGTAGAGGGTTTCTTG
ACTTAG

Upstream 100 bases:

>100_bases
GCGAGGTTACGCAGGGGGCCAGGTGTGGAACCCCTTCCACGTAACCCCGCGTAACCTCCCCCCTGCTACCCTGGGGCTAA
CCCGTAAGGGGGTGAAGGAG

Downstream 100 bases:

>100_bases
CTGAGGGTGTTCTTATTAGCCACGATCCTGTTTTTGGCCAGCTGCGCTGGGGGAGCCGTAGGCACCGCGGCCTCCCTCTA
CCTCGCTCGCTTAGACAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLKEVQEAKVGGRTRRVYVRPFAWGLKNPSHMEWTPDGRLLVSEHTAGTVRDISKGGDASEAKPLAYNLQGPAAIRPTED
GKVLVVETWGGAIADIAGGGDATKLPKLTENLKGPYTLAVLNPGKKGETLFVSESSSSFMTQITRLSLGDHEREPKAFIL
DIPARHGEPGLTPPESWPDKWEKYAAAGCVKNWIDDAAGRGFFYLAVGSLGQIFRINPDELPEKITYSELVAHPNALVAW
GLHRLGGMRFHPSSGLLFAVQPEMGEVIAVDPAQPGNYHFQPPVVRGLRMPTCVRFSQDSEKMYVCSSADGVVWEVEGFL
T

Sequences:

>Translated_321_residues
MLKEVQEAKVGGRTRRVYVRPFAWGLKNPSHMEWTPDGRLLVSEHTAGTVRDISKGGDASEAKPLAYNLQGPAAIRPTED
GKVLVVETWGGAIADIAGGGDATKLPKLTENLKGPYTLAVLNPGKKGETLFVSESSSSFMTQITRLSLGDHEREPKAFIL
DIPARHGEPGLTPPESWPDKWEKYAAAGCVKNWIDDAAGRGFFYLAVGSLGQIFRINPDELPEKITYSELVAHPNALVAW
GLHRLGGMRFHPSSGLLFAVQPEMGEVIAVDPAQPGNYHFQPPVVRGLRMPTCVRFSQDSEKMYVCSSADGVVWEVEGFL
T
>Mature_321_residues
MLKEVQEAKVGGRTRRVYVRPFAWGLKNPSHMEWTPDGRLLVSEHTAGTVRDISKGGDASEAKPLAYNLQGPAAIRPTED
GKVLVVETWGGAIADIAGGGDATKLPKLTENLKGPYTLAVLNPGKKGETLFVSESSSSFMTQITRLSLGDHEREPKAFIL
DIPARHGEPGLTPPESWPDKWEKYAAAGCVKNWIDDAAGRGFFYLAVGSLGQIFRINPDELPEKITYSELVAHPNALVAW
GLHRLGGMRFHPSSGLLFAVQPEMGEVIAVDPAQPGNYHFQPPVVRGLRMPTCVRFSQDSEKMYVCSSADGVVWEVEGFL
T

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35007; Mature: 35007

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEVQEAKVGGRTRRVYVRPFAWGLKNPSHMEWTPDGRLLVSEHTAGTVRDISKGGDAS
CCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCEECCCCCEEEECCCCCCHHHHHCCCCCC
EAKPLAYNLQGPAAIRPTEDGKVLVVETWGGAIADIAGGGDATKLPKLTENLKGPYTLAV
CCCCEEEECCCCEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHCCCCEEEEE
LNPGKKGETLFVSESSSSFMTQITRLSLGDHEREPKAFILDIPARHGEPGLTPPESWPDK
ECCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH
WEKYAAAGCVKNWIDDAAGRGFFYLAVGSLGQIFRINPDELPEKITYSELVAHPNALVAW
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHHCCCCCHHHHHCCCCHHHHH
GLHRLGGMRFHPSSGLLFAVQPEMGEVIAVDPAQPGNYHFQPPVVRGLRMPTCVRFSQDS
HHHHHCCEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHCCCCCEEEEECCCC
EKMYVCSSADGVVWEVEGFLT
CEEEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MLKEVQEAKVGGRTRRVYVRPFAWGLKNPSHMEWTPDGRLLVSEHTAGTVRDISKGGDAS
CCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCEECCCCCEEEECCCCCCHHHHHCCCCCC
EAKPLAYNLQGPAAIRPTEDGKVLVVETWGGAIADIAGGGDATKLPKLTENLKGPYTLAV
CCCCEEEECCCCEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHCCCCEEEEE
LNPGKKGETLFVSESSSSFMTQITRLSLGDHEREPKAFILDIPARHGEPGLTPPESWPDK
ECCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH
WEKYAAAGCVKNWIDDAAGRGFFYLAVGSLGQIFRINPDELPEKITYSELVAHPNALVAW
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHHCCCCCHHHHHCCCCHHHHH
GLHRLGGMRFHPSSGLLFAVQPEMGEVIAVDPAQPGNYHFQPPVVRGLRMPTCVRFSQDS
HHHHHCCEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHCCCCCEEEEECCCC
EKMYVCSSADGVVWEVEGFLT
CEEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA