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The map label for this gene is 54297320

Identifier: 54297320

GI number: 54297320

Start: 1519873

End: 1520469

Strand: Direct

Name: 54297320

Synonym: lpp1365

Alternate gene names: NA

Gene position: 1519873-1520469 (Clockwise)

Preceding gene: 54297318

Following gene: 54297321

Centisome position: 43.38

GC content: 40.2

Gene sequence:

>597_bases
ATGAAGATTCGATTTACTTTACTTTGTTTTAGCATTTTTCTTACGGGCTGCGTCAGCAAACCTCCAGCAGACATTAATAA
TATTTGTAATATATTTAAACAATATCCGAAATGGTATGTGGATTCAAAAGATGTTGAGAGACGATGGAAGGTTCCGGTTC
CGGTCCAAATGGCAATTATTCATCAAGAATCAAAATTTAATGCTCGAGCCAGGCCACCAAGAACCAAACTGTTATGGATA
ATTCCATGGACAAGGCCATCGACAGCTTACGGATATACTCAAGCGTTGCGTTCGACTTGGGACAATTATAAACGCACCAA
TGGATGGTTTTGGTCATCACGCGACGATTTTGGAGATGGTGTTGATTTTATAGGATGGTATGCTAACCAGGCGAATATTA
AGGCAGGTATTCCCCGAACAGATGCTTACTCACTTTATTTGGCTTATCATGAAGGGATAGGCGGTTATCAAAGGAAAACC
TATTTGAAAAAACCATGGTTGATTTCTGTAGCGCGCAAAGTGAAGGCTAAATCACAACTTTATGCAATGCAGCTCAATTC
TTGTCAAGGTTCGTTGAAGTCACGTTCCTGGTGGTAA

Upstream 100 bases:

>100_bases
GATTGTATGCAGTATATTTGATACAATATTTTTTAAATTGATACCTTATATCGTAGCATTGATATTCAATACTGCAGGAT
GAGTTTTTTATCATTAAATC

Downstream 100 bases:

>100_bases
TTAAGATGGCCTAATTATGTTCTTCCCAGTGGAAATAAGGTCAGACTTGGAACATATATGATTTTGTGTGTTTATAATAA
TCGCCATAACACGAAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAIIHQESKFNARARPPRTKLLWI
IPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDGVDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKT
YLKKPWLISVARKVKAKSQLYAMQLNSCQGSLKSRSWW

Sequences:

>Translated_198_residues
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAIIHQESKFNARARPPRTKLLWI
IPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDGVDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKT
YLKKPWLISVARKVKAKSQLYAMQLNSCQGSLKSRSWW
>Mature_198_residues
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAIIHQESKFNARARPPRTKLLWI
IPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDGVDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKT
YLKKPWLISVARKVKAKSQLYAMQLNSCQGSLKSRSWW

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23207; Mature: 23207

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAII
CEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEE
HQESKFNARARPPRTKLLWIIPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDG
ECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
VDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKTYLKKPWLISVARKVKAKSQL
CCEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
YAMQLNSCQGSLKSRSWW
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAII
CEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEE
HQESKFNARARPPRTKLLWIIPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDG
ECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
VDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKTYLKKPWLISVARKVKAKSQL
CCEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
YAMQLNSCQGSLKSRSWW
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA