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The map label for this gene is fimV [H]

Identifier: 54297218

GI number: 54297218

Start: 1399059

End: 1401752

Strand: Direct

Name: fimV [H]

Synonym: lpp1263

Alternate gene names: 54297218

Gene position: 1399059-1401752 (Clockwise)

Preceding gene: 54297215

Following gene: 54297221

Centisome position: 39.93

GC content: 39.16

Gene sequence:

>2694_bases
TTGAAAAAAACTGTTCTGCATGCGGCTATATTCTCATTGACTATGCCAATATCTCTTTATGCGCTTGGCTTAGGGGAAAT
GAAGGTACAGTCCTCATTGGATCAGCCTTTTTCAGCCGAAATCGAATTAATAGATGTAGGAGCAGATCCTCTTGCCAGTA
TCAAGGTGAGTTTGGCTGATCCGGAGCAATTTGAACAAATTGGACTTGAGCGAACTGCAGTCTTGTCTTTGTTACGGTTT
CAGGTTGAGAGAAACCCAAAAGGTGCCCCTGTTGTAAAAGTATCGTCTACAGAAAGAATGACAGAACCATATATGGAAAT
TGTCGTCGATCTAACCTGGCCAAAAGGTCAATTATACAAGGCCTATACAGTATTATTAGATCCGCCAGGATATCAATTGG
GAATTACCACCGCTCAAAGCAGGCCAGTTTATTACAAGAAGAAATCCGCAAGTTACAGTAATGAGCCTGGTGTTATTGAA
AAGACTGTGATTACTACAGTGGAGCATGGCCCTGTATCAAAAAATGACAGCAAAAAGAAAACGACTTATGGTCCAACTGT
AACCAATGAAAACGTTTGGCAAATTGCTCAAAGATATAAAACTTCAAAATTGATTTTGCCTCAGGTTGTATTAGCAATAG
TTGGTGCGAATCCCGAAGCATTTAAGGATGGAAATTTAAACGGTTTAAAAGTTGGCGTTCGGCTAGTTATTCCATCAACT
GAAGAAATTGCAAAAGTGCCTTCTGATTTGGCTATTGAAGAGGTGATGGCTCACGACAAAGCCTGGAATGAACATACATC
TATTAATCATGTATTAGCTCCGCCATACATCAACAGTCCAATAGCGGACATGACTCCAAAACAGACTAAAGCCTCTTCAA
TCCCGGTAATTCCAAAGTTTACTATTGGAGAAAACTCTAACATTCCAACACTTCAACAATTAATCCCCGATAGCACTTCA
GTTTCGATAGATACATCTACCCAGCAGCAACCTGTGCAAAACAGCAATATAGTACAGACAACGGGGCAAAATGAAAAAAT
TAAGGCAGAAATTTCAATTACAACAGCAGCAGTTGAATCAGTTCGGGAAGCAAATGCATTATTGATGGAACAATTACGAA
TTCTGCAAGAGCAAAATAAAAAATTGCAGGAAAAGCTGGATAAGCGTGAGAAAGAAATAGAGTTAATGCGTACGCAGGTT
CAAACCATGTTGAAGGAGCGTAAAGCCATCGCGTCTCAAGCCAGTTCACTTCCCAATAATGAACAAGGGATGAACCTTTG
GCCGTATATCATTTTATTGATATTTGCTGCAGGAGGAGCAGGATTTGCTTATTGGTACCTCAGACAACGCCAACACAGAG
AGGATATTTCTCCTTACAAAACAGATTCTGATTCAAGTCCGAAGCCATTTATGCCTTTAGTTGAGCCAGCGAAATACGAA
CCAGATACCCAGGCTGATGATAAGGAAACTTCCGTCCAGGAAAAAGTATCTGACAGTGAAAAAGAAACTGGAGTTGGTGT
TTCTAAAGCGGATTGGACTGAGTATCAACCTAAAGAAATGGATAAAATCGAAAAAGCTGATGCGGTAGAATCTGAAACAG
TTGAGGATGTGACATATCTTGGAGGTACAGAACAGTTAACAGCAAAACAAGATACAGAATTGGAACCAGAGGTTCAGACT
AAACCAGAGGTTCAGACTAAACCAGAGGTTCAGACTAAACCAGAAGTTCAGACTAAACCAGAAGTTCAGACTAAACCAGA
AGTTCAGACTAAACCAGAGGTTCAGACTAAACCAGAGGTTCAGACTAAACCAGAGGTTCAGACTAAACCAGAAGTTCAGA
CTAAACCAGAAGTTCAGACTAAACCAGAAGTTCAGACTAAACCAGAAGTTCAGGCTAAACCAGAAGTTCAGGCTAAACCA
GAAGTTCAGGCTGAGCCAGAAGTTCAGGCTGAGCCAGAAGTTCAGGCTGGAGAAAATCAAATTATGTTTGAGCCCGTTAT
GGAGCCTGAGCAATTGGATGTTAACAGGGATGATGAGGTTGATAATTCTCAGTTAAGTGAAGATGAAACTCAGCAAACTG
AAGGCCATCAAAGTTCTGAGATGATAGAGTTTGAGTCAGGTTTACATGAATTAATCAAAGATAAGCCCAAAACTAAAATA
ACAGAATCAACAGATGAAGGAGATGATAATGGAATAGATTTCATTCCTTTAACTATAAATGATGCTGACAAAACATTAAA
GCATGAACAAGAAATTGAGAAGTCAGACAAAAAGGAAGATAAAAAATCAGAAGAATTTTCTACGAAGGAAAATAAGTTTG
ATTTAGATAATTCAGACTTTGATATGGAAAACCTCGAATCCGAACCTGAAATAAGCCAGGAGGAAAAAGAAGACCACATT
TCAGAAATAACTGAATTTGACCAGAAATCTACTCAGGAAGAAAAAACAGAAAAAGGTATTTCTATATCTCAATCTGTTGA
TAAGGCGACATTCACCAAGTCATCCGGTGAAAACAATGAAACCTCCAATCCATTGAAGAGTAAGAAGGCATTAGATACTT
TGTTAGATTTGGCAAAAACCTATATTAGTATGGGCGATATAGAAACAGCAAGAAGTTCTCTTGAGGAAGTGATCGAGCAT
GGAAGTGCCAATCAAAAAGAGCAAGCCAGGCAGTTACTGGATCAATTAAAGTAA

Upstream 100 bases:

>100_bases
ATAATTTCGTGTTTTCTTGAATAGACTAACGGATAATGATACTTTTTACTTAGGCAATTAAATCATCAACATCTTGTATC
ACAGGTGCATGGAGCTCTGA

Downstream 100 bases:

>100_bases
CAAATAACACAAAAATTACGCCCCCAATCTCTTAATATTCATCTTTGCTATTTAAAAGTCAGGCTTATTAGTCATTAAAT
AAAATACTCCAACAAGGCTT

Product: FimV protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 897; Mature: 897

Protein sequence:

>897_residues
MKKTVLHAAIFSLTMPISLYALGLGEMKVQSSLDQPFSAEIELIDVGADPLASIKVSLADPEQFEQIGLERTAVLSLLRF
QVERNPKGAPVVKVSSTERMTEPYMEIVVDLTWPKGQLYKAYTVLLDPPGYQLGITTAQSRPVYYKKKSASYSNEPGVIE
KTVITTVEHGPVSKNDSKKKTTYGPTVTNENVWQIAQRYKTSKLILPQVVLAIVGANPEAFKDGNLNGLKVGVRLVIPST
EEIAKVPSDLAIEEVMAHDKAWNEHTSINHVLAPPYINSPIADMTPKQTKASSIPVIPKFTIGENSNIPTLQQLIPDSTS
VSIDTSTQQQPVQNSNIVQTTGQNEKIKAEISITTAAVESVREANALLMEQLRILQEQNKKLQEKLDKREKEIELMRTQV
QTMLKERKAIASQASSLPNNEQGMNLWPYIILLIFAAGGAGFAYWYLRQRQHREDISPYKTDSDSSPKPFMPLVEPAKYE
PDTQADDKETSVQEKVSDSEKETGVGVSKADWTEYQPKEMDKIEKADAVESETVEDVTYLGGTEQLTAKQDTELEPEVQT
KPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQAKPEVQAKP
EVQAEPEVQAEPEVQAGENQIMFEPVMEPEQLDVNRDDEVDNSQLSEDETQQTEGHQSSEMIEFESGLHELIKDKPKTKI
TESTDEGDDNGIDFIPLTINDADKTLKHEQEIEKSDKKEDKKSEEFSTKENKFDLDNSDFDMENLESEPEISQEEKEDHI
SEITEFDQKSTQEEKTEKGISISQSVDKATFTKSSGENNETSNPLKSKKALDTLLDLAKTYISMGDIETARSSLEEVIEH
GSANQKEQARQLLDQLK

Sequences:

>Translated_897_residues
MKKTVLHAAIFSLTMPISLYALGLGEMKVQSSLDQPFSAEIELIDVGADPLASIKVSLADPEQFEQIGLERTAVLSLLRF
QVERNPKGAPVVKVSSTERMTEPYMEIVVDLTWPKGQLYKAYTVLLDPPGYQLGITTAQSRPVYYKKKSASYSNEPGVIE
KTVITTVEHGPVSKNDSKKKTTYGPTVTNENVWQIAQRYKTSKLILPQVVLAIVGANPEAFKDGNLNGLKVGVRLVIPST
EEIAKVPSDLAIEEVMAHDKAWNEHTSINHVLAPPYINSPIADMTPKQTKASSIPVIPKFTIGENSNIPTLQQLIPDSTS
VSIDTSTQQQPVQNSNIVQTTGQNEKIKAEISITTAAVESVREANALLMEQLRILQEQNKKLQEKLDKREKEIELMRTQV
QTMLKERKAIASQASSLPNNEQGMNLWPYIILLIFAAGGAGFAYWYLRQRQHREDISPYKTDSDSSPKPFMPLVEPAKYE
PDTQADDKETSVQEKVSDSEKETGVGVSKADWTEYQPKEMDKIEKADAVESETVEDVTYLGGTEQLTAKQDTELEPEVQT
KPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQAKPEVQAKP
EVQAEPEVQAEPEVQAGENQIMFEPVMEPEQLDVNRDDEVDNSQLSEDETQQTEGHQSSEMIEFESGLHELIKDKPKTKI
TESTDEGDDNGIDFIPLTINDADKTLKHEQEIEKSDKKEDKKSEEFSTKENKFDLDNSDFDMENLESEPEISQEEKEDHI
SEITEFDQKSTQEEKTEKGISISQSVDKATFTKSSGENNETSNPLKSKKALDTLLDLAKTYISMGDIETARSSLEEVIEH
GSANQKEQARQLLDQLK
>Mature_897_residues
MKKTVLHAAIFSLTMPISLYALGLGEMKVQSSLDQPFSAEIELIDVGADPLASIKVSLADPEQFEQIGLERTAVLSLLRF
QVERNPKGAPVVKVSSTERMTEPYMEIVVDLTWPKGQLYKAYTVLLDPPGYQLGITTAQSRPVYYKKKSASYSNEPGVIE
KTVITTVEHGPVSKNDSKKKTTYGPTVTNENVWQIAQRYKTSKLILPQVVLAIVGANPEAFKDGNLNGLKVGVRLVIPST
EEIAKVPSDLAIEEVMAHDKAWNEHTSINHVLAPPYINSPIADMTPKQTKASSIPVIPKFTIGENSNIPTLQQLIPDSTS
VSIDTSTQQQPVQNSNIVQTTGQNEKIKAEISITTAAVESVREANALLMEQLRILQEQNKKLQEKLDKREKEIELMRTQV
QTMLKERKAIASQASSLPNNEQGMNLWPYIILLIFAAGGAGFAYWYLRQRQHREDISPYKTDSDSSPKPFMPLVEPAKYE
PDTQADDKETSVQEKVSDSEKETGVGVSKADWTEYQPKEMDKIEKADAVESETVEDVTYLGGTEQLTAKQDTELEPEVQT
KPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQAKPEVQAKP
EVQAEPEVQAEPEVQAGENQIMFEPVMEPEQLDVNRDDEVDNSQLSEDETQQTEGHQSSEMIEFESGLHELIKDKPKTKI
TESTDEGDDNGIDFIPLTINDADKTLKHEQEIEKSDKKEDKKSEEFSTKENKFDLDNSDFDMENLESEPEISQEEKEDHI
SEITEFDQKSTQEEKTEKGISISQSVDKATFTKSSGENNETSNPLKSKKALDTLLDLAKTYISMGDIETARSSLEEVIEH
GSANQKEQARQLLDQLK

Specific function: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 7

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-2 family [H]

Homologues:

Organism=Drosophila melanogaster, GI24639970, Length=139, Percent_Identity=38.1294964028777, Blast_Score=92, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006847
- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR000178
- InterPro:   IPR015760
- InterPro:   IPR023115
- InterPro:   IPR004161
- InterPro:   IPR009000 [H]

Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF11987 IF-2; PF04760 IF2_N [H]

EC number: NA

Molecular weight: Translated: 100344; Mature: 100344

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVLHAAIFSLTMPISLYALGLGEMKVQSSLDQPFSAEIELIDVGADPLASIKVSLAD
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECC
PEQFEQIGLERTAVLSLLRFQVERNPKGAPVVKVSSTERMTEPYMEIVVDLTWPKGQLYK
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHEEEECCCCCCCEEE
AYTVLLDPPGYQLGITTAQSRPVYYKKKSASYSNEPGVIEKTVITTVEHGPVSKNDSKKK
EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEHHEEEEECCCCCCCCCCCCC
TTYGPTVTNENVWQIAQRYKTSKLILPQVVLAIVGANPEAFKDGNLNGLKVGVRLVIPST
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEEEECCH
EEIAKVPSDLAIEEVMAHDKAWNEHTSINHVLAPPYINSPIADMTPKQTKASSIPVIPKF
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
TIGENSNIPTLQQLIPDSTSVSIDTSTQQQPVQNSNIVQTTGQNEKIKAEISITTAAVES
ECCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEEHHHHHHH
VREANALLMEQLRILQEQNKKLQEKLDKREKEIELMRTQVQTMLKERKAIASQASSLPNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EQGMNLWPYIILLIFAAGGAGFAYWYLRQRQHREDISPYKTDSDSSPKPFMPLVEPAKYE
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDTQADDKETSVQEKVSDSEKETGVGVSKADWTEYQPKEMDKIEKADAVESETVEDVTYL
CCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GGTEQLTAKQDTELEPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQAKPEVQAKPEVQAEPEVQAEPEVQAGENQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IMFEPVMEPEQLDVNRDDEVDNSQLSEDETQQTEGHQSSEMIEFESGLHELIKDKPKTKI
EEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
TESTDEGDDNGIDFIPLTINDADKTLKHEQEIEKSDKKEDKKSEEFSTKENKFDLDNSDF
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DMENLESEPEISQEEKEDHISEITEFDQKSTQEEKTEKGISISQSVDKATFTKSSGENNE
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
TSNPLKSKKALDTLLDLAKTYISMGDIETARSSLEEVIEHGSANQKEQARQLLDQLK
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTVLHAAIFSLTMPISLYALGLGEMKVQSSLDQPFSAEIELIDVGADPLASIKVSLAD
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECC
PEQFEQIGLERTAVLSLLRFQVERNPKGAPVVKVSSTERMTEPYMEIVVDLTWPKGQLYK
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHEEEECCCCCCCEEE
AYTVLLDPPGYQLGITTAQSRPVYYKKKSASYSNEPGVIEKTVITTVEHGPVSKNDSKKK
EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEHHEEEEECCCCCCCCCCCCC
TTYGPTVTNENVWQIAQRYKTSKLILPQVVLAIVGANPEAFKDGNLNGLKVGVRLVIPST
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEEEECCH
EEIAKVPSDLAIEEVMAHDKAWNEHTSINHVLAPPYINSPIADMTPKQTKASSIPVIPKF
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
TIGENSNIPTLQQLIPDSTSVSIDTSTQQQPVQNSNIVQTTGQNEKIKAEISITTAAVES
ECCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEEHHHHHHH
VREANALLMEQLRILQEQNKKLQEKLDKREKEIELMRTQVQTMLKERKAIASQASSLPNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EQGMNLWPYIILLIFAAGGAGFAYWYLRQRQHREDISPYKTDSDSSPKPFMPLVEPAKYE
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDTQADDKETSVQEKVSDSEKETGVGVSKADWTEYQPKEMDKIEKADAVESETVEDVTYL
CCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GGTEQLTAKQDTELEPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQTKPEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QTKPEVQTKPEVQTKPEVQTKPEVQTKPEVQAKPEVQAKPEVQAEPEVQAEPEVQAGENQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IMFEPVMEPEQLDVNRDDEVDNSQLSEDETQQTEGHQSSEMIEFESGLHELIKDKPKTKI
EEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
TESTDEGDDNGIDFIPLTINDADKTLKHEQEIEKSDKKEDKKSEEFSTKENKFDLDNSDF
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DMENLESEPEISQEEKEDHISEITEFDQKSTQEEKTEKGISISQSVDKATFTKSSGENNE
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
TSNPLKSKKALDTLLDLAKTYISMGDIETARSSLEEVIEHGSANQKEQARQLLDQLK
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA