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The map label for this gene is galE [H]

Identifier: 54296788

GI number: 54296788

Start: 924936

End: 925892

Strand: Direct

Name: galE [H]

Synonym: lpp0827

Alternate gene names: 54296788

Gene position: 924936-925892 (Clockwise)

Preceding gene: 54296787

Following gene: 54296789

Centisome position: 26.4

GC content: 33.65

Gene sequence:

>957_bases
GTGGCAAAAATATTAATTACCGGCGCGACAGGATTTATAGGACGAAGTTTAGTTCCTGCCTTGCTTTCTGAAGGACATGA
CGTGCGTTGTGCTGTTTTGCAGCTGGATAGTACATTACAAGCAGAACAAATAGTAATAAACAATCTTGAGGTTCACACTG
ATTGGACTGATGCTTTGCGGAATGTGGAAATAGTGATTCATTTAGCTGCCAGAGTTCACATAATGAAAGAATATGCAACA
TCCTCTTTAGACGAATATTGCAAAATTAATAGTATTGCTACAAAAAATTTTGTTGAGCAGGCAGTTCAAAATAATGTAAA
GCGATTTATATTTCTTAGTACCATAAAAGTACATGGCGAATTTTCACAAAATAATCTGCCATTTTCTGAAGATTGTAGGA
CTCAACCTGAAGATCCCTATGCAAAAAGTAAGTTGTATGCTGAACAATTTATACAAGAAATTTGCCAGAATGCCCGGATG
GAGTTTGTTATATTAAGACCACCGTTGGTCTATGGACCTTATGTGAAGGCTAATTTTCTCAGGATATTACAACTTGTTGA
TAAAAAATGGCCTTTGCCTTTTGGTAGTATTTATAATAAACGAACTTTTATATATATTGATAATTTGGTTTCAGCAATAA
GCGCGGTTGTGAGCGAGCCTAGTGCTGCTAATCAAGTTTATTTGGTAGCAGATGATTGTTCATGGTCTTTAACACAACTA
GTGCAAACCTTATCGCGCAAGATGAATACAAAATTATTTTTAATCCCGATTCCAGTTCAAATTTTAATTTTTCTATTTAA
ATTATGTGGACTTAAAAATATTAATACAAGATTGTTTTCTTCTTTAGAAGTAAGTAATGAGAAAATTAAATCCCAATTAG
GGTGGACACCACCAGTTAGTTCTATTGATGGATTAGAAAAGACGGTAAAATGGTATCAAAATGAATATAATACTTAA

Upstream 100 bases:

>100_bases
TACTGTGCAGGGCTAGAGAGCTTAATAAAAGTAGTTACGGTCAATATCTTGCAGAATTGCTTAATCATAAACGATATTAA
TTTTTTCAGGTTATAAAGTA

Downstream 100 bases:

>100_bases
TGTATTTTTAATATTTGTCTCAGCAATTTTGACTAAATTATTTGCCTTGTTTGCGCAGCATACAAAATTGATTGATATTC
CAAATGAAAGAAATTTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALRNVEIVIHLAARVHIMKEYAT
SSLDEYCKINSIATKNFVEQAVQNNVKRFIFLSTIKVHGEFSQNNLPFSEDCRTQPEDPYAKSKLYAEQFIQEICQNARM
EFVILRPPLVYGPYVKANFLRILQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVSEPSAANQVYLVADDCSWSLTQL
VQTLSRKMNTKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNEKIKSQLGWTPPVSSIDGLEKTVKWYQNEYNT

Sequences:

>Translated_318_residues
MAKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALRNVEIVIHLAARVHIMKEYAT
SSLDEYCKINSIATKNFVEQAVQNNVKRFIFLSTIKVHGEFSQNNLPFSEDCRTQPEDPYAKSKLYAEQFIQEICQNARM
EFVILRPPLVYGPYVKANFLRILQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVSEPSAANQVYLVADDCSWSLTQL
VQTLSRKMNTKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNEKIKSQLGWTPPVSSIDGLEKTVKWYQNEYNT
>Mature_317_residues
AKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALRNVEIVIHLAARVHIMKEYATS
SLDEYCKINSIATKNFVEQAVQNNVKRFIFLSTIKVHGEFSQNNLPFSEDCRTQPEDPYAKSKLYAEQFIQEICQNARME
FVILRPPLVYGPYVKANFLRILQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVSEPSAANQVYLVADDCSWSLTQLV
QTLSRKMNTKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNEKIKSQLGWTPPVSSIDGLEKTVKWYQNEYNT

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657641, Length=343, Percent_Identity=25.6559766763848, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI87081792, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17568069, Length=344, Percent_Identity=25.8720930232558, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115532424, Length=335, Percent_Identity=25.3731343283582, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71987463, Length=322, Percent_Identity=25.1552795031056, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 36138; Mature: 36007

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALR
CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHEECEEEECCHHHHHC
NVEIVIHLAARVHIMKEYATSSLDEYCKINSIATKNFVEQAVQNNVKRFIFLSTIKVHGE
CHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEEECC
FSQNNLPFSEDCRTQPEDPYAKSKLYAEQFIQEICQNARMEFVILRPPLVYGPYVKANFL
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHHHHHH
RILQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVSEPSAANQVYLVADDCSWSLTQL
HHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH
VQTLSRKMNTKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNEKIKSQLGWTPPVS
HHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SIDGLEKTVKWYQNEYNT
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALR
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHEECEEEECCHHHHHC
NVEIVIHLAARVHIMKEYATSSLDEYCKINSIATKNFVEQAVQNNVKRFIFLSTIKVHGE
CHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEEECC
FSQNNLPFSEDCRTQPEDPYAKSKLYAEQFIQEICQNARMEFVILRPPLVYGPYVKANFL
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHHHHHH
RILQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVSEPSAANQVYLVADDCSWSLTQL
HHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH
VQTLSRKMNTKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNEKIKSQLGWTPPVS
HHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SIDGLEKTVKWYQNEYNT
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]