Click here to switch to the map view.

The map label for this gene is 54295767

Identifier: 54295767

GI number: 54295767

Start: 3261124

End: 3263307

Strand: Reverse

Name: 54295767

Synonym: lpl2857

Alternate gene names: NA

Gene position: 3263307-3261124 (Counterclockwise)

Preceding gene: 54295770

Following gene: 54295765

Centisome position: 97.54

GC content: 33.61

Gene sequence:

>2184_bases
ATGACCAGAAATAAAACAGAAAAAAATATTCAATTTGACTTTAATGAATGTTTGGAAAAAGCCAAAGCCAACGAATTGTC
TTCTTTGGACATTTTAAATAATAAGGACACGTGGGATAGTTTATCTATCAAACAAAAACAACGGTTATGTGTGGAGTGGG
TGCGGCATGGATACTTCAGTTTTGAAGAATTTAACGACCTGGATTGTGCACCAGAGCTCTATGGATTGTTGAATGAAGAC
ATATATATTGTTGGCATAAAGCAAGATCCTGTTCGTTTACAGAATATTCCTGACGACATTCTATCAACAATTTTACCCGT
CTTATATGAAGATAGAAATTTTATGGATGATCTTATTGATAAAGCTTGTGAAGATATAACGATTCTCCAAAGCTCTCAAG
AGCTTCATAAAAAAGTAATAGAGCTTGCGGCACATCAGATATGGGGAGGGAAAAAATCTATATTCATAAGGGGGGATACT
CGATTTTATAAAGATGTCGAGGAATGTATCATAGAATCTATCAATCAGGGAAAATTTGTAATTAATAATGAAAATACTTT
TTTGTCCGGTCAATTTCACTATTCTTCCGGTTTTCTAGCACATAGTCCTGCGATATGCATGGCCATACTAAGAAAAAACC
CTGGAAAATTATTTATTGTATCGAAAGATATATTACCCCTAATAATTAACGATAGTGAAACGATGGGGGTCATCGTACAA
GCTCTACGTTGTGGGGAAATTGAAATGAAAACAATTCCCACCTCTATGAAAAACAAGGATATTTGCTTTGCAGCACTTAT
ATTCAATCTTAGAAATAATATTTTTGTTCCAGAGGAAATCCGAGAACAGCTTGATTATGAAGAGATTTACTATGAGGCAA
TGTTAGCAAATCCTGCCGCCTTAAAAGACATTCCTGACGATATGAAAAGTAAAATTATCAATCGATTTTCTCATGAGGAA
TTTTTTCAACTTATTCAAAAATACCATTTTAATTGTCTACCCTATTTGCCTGATGAATGGGTAGAAAAAATAAAAAGGGA
GGTATTGCCTAAAGTTAGGACCGTTGTCGTCTATGACCCTACTCGTTATGATCGGGAAATACGAATGAGTTGTCAATTAT
ATGCAAGCAGGCCTCAATATCAAGATCAAACGATCGTTATTAATAGCGAGGATTTGAATCATTTATTAAAAACGTTATCT
AAAGTATCCGAGCATTCCAGTATAAAACTGGTGATCAATGGTCACAGCAGTTATAGGTCAGAGCAATTGGCTGGATTGAG
TAGTCAATCCATCGTGCATTATCTAGAAAAATATCCCATTATTCATGATCTCGTCCTATCAGGTTGTAGCACGGTAAAAA
TGGAAGTGACTGCTCAAGAGAAAGAGATGATTAAGGAATTTATTTTCCTTATAAACCAAAAGAGTATTGAAAATAATAGG
TCACCAGAAGAAATTATCGATGAGCTTGTGGCGAACGGTGTATTTGAAAAAGGCCATCCAGAATATAAAGAATATAAAAA
ATTTGTACCATTCCTTCAGAGCATTACAGTAACGCCAGAAGAAATAGAAAAAAATTTAAAAGAATCGTTGATGAAGCTGG
TCATTGATGAACTTGAAAAATCAAAAAAAATCTCTCATTCCATTACTATAAAAGCCATTCCTAGTCCACTTAATGTAAAT
GAAACATACGAAAAAAGTACCCGAGGCTTTGTCGTATGGAATAAAGAATTATACAAGGAAGGGAAAACAGGGCTCGATTC
AGATTTAAGGAAATTGGAATATAGAAATTACTTTTTTAATACAATAAAGCCACCAGTTATGGCAAAAATTTATATTGCTA
AAGAAAGAATTACCAAAAAGGGTGAGAACAAGCTCAATGGAAGAAATGAAAAGGCTTATATTATTGTAACTAAAGGAAAC
AGTGCGCCGGAACTTCATTATTACGATCCTGCTGCAAAAATAATTAGCAAGCTGGATTTAAAAGAAAATCATTCACATGA
ATTATTATCAATAGTGATGCAAACGATCGGATTGGAAAATATTAAACAAGGCATTAATCTTTTCAACTTGGACGATCGTA
ATCAAAAAGAAAAATTAGACGATATTATTCTTTCGATCGAAGATGGTACAAATAAACAGGAACTAACAAGTGCTAAATCA
ATACGTTATCACATTACGAAGTAA

Upstream 100 bases:

>100_bases
CTATACTAATTAAGTAACTATTAAAAATACGACTAACGAAAATATCACCTTGATGACTTTGGGTTCATTTCAAGAATAGA
AAATATTGGGTGGTTAAGCA

Downstream 100 bases:

>100_bases
CTTCTGCATCATGTGAGAATTTTGCATTAGCCTTTCCCTGGATTAAGCTTTACCTAATCCAGGCTATGATGAACTTGGTG
TTGGTAATCAATCTTATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MTRNKTEKNIQFDFNECLEKAKANELSSLDILNNKDTWDSLSIKQKQRLCVEWVRHGYFSFEEFNDLDCAPELYGLLNED
IYIVGIKQDPVRLQNIPDDILSTILPVLYEDRNFMDDLIDKACEDITILQSSQELHKKVIELAAHQIWGGKKSIFIRGDT
RFYKDVEECIIESINQGKFVINNENTFLSGQFHYSSGFLAHSPAICMAILRKNPGKLFIVSKDILPLIINDSETMGVIVQ
ALRCGEIEMKTIPTSMKNKDICFAALIFNLRNNIFVPEEIREQLDYEEIYYEAMLANPAALKDIPDDMKSKIINRFSHEE
FFQLIQKYHFNCLPYLPDEWVEKIKREVLPKVRTVVVYDPTRYDREIRMSCQLYASRPQYQDQTIVINSEDLNHLLKTLS
KVSEHSSIKLVINGHSSYRSEQLAGLSSQSIVHYLEKYPIIHDLVLSGCSTVKMEVTAQEKEMIKEFIFLINQKSIENNR
SPEEIIDELVANGVFEKGHPEYKEYKKFVPFLQSITVTPEEIEKNLKESLMKLVIDELEKSKKISHSITIKAIPSPLNVN
ETYEKSTRGFVVWNKELYKEGKTGLDSDLRKLEYRNYFFNTIKPPVMAKIYIAKERITKKGENKLNGRNEKAYIIVTKGN
SAPELHYYDPAAKIISKLDLKENHSHELLSIVMQTIGLENIKQGINLFNLDDRNQKEKLDDIILSIEDGTNKQELTSAKS
IRYHITK

Sequences:

>Translated_727_residues
MTRNKTEKNIQFDFNECLEKAKANELSSLDILNNKDTWDSLSIKQKQRLCVEWVRHGYFSFEEFNDLDCAPELYGLLNED
IYIVGIKQDPVRLQNIPDDILSTILPVLYEDRNFMDDLIDKACEDITILQSSQELHKKVIELAAHQIWGGKKSIFIRGDT
RFYKDVEECIIESINQGKFVINNENTFLSGQFHYSSGFLAHSPAICMAILRKNPGKLFIVSKDILPLIINDSETMGVIVQ
ALRCGEIEMKTIPTSMKNKDICFAALIFNLRNNIFVPEEIREQLDYEEIYYEAMLANPAALKDIPDDMKSKIINRFSHEE
FFQLIQKYHFNCLPYLPDEWVEKIKREVLPKVRTVVVYDPTRYDREIRMSCQLYASRPQYQDQTIVINSEDLNHLLKTLS
KVSEHSSIKLVINGHSSYRSEQLAGLSSQSIVHYLEKYPIIHDLVLSGCSTVKMEVTAQEKEMIKEFIFLINQKSIENNR
SPEEIIDELVANGVFEKGHPEYKEYKKFVPFLQSITVTPEEIEKNLKESLMKLVIDELEKSKKISHSITIKAIPSPLNVN
ETYEKSTRGFVVWNKELYKEGKTGLDSDLRKLEYRNYFFNTIKPPVMAKIYIAKERITKKGENKLNGRNEKAYIIVTKGN
SAPELHYYDPAAKIISKLDLKENHSHELLSIVMQTIGLENIKQGINLFNLDDRNQKEKLDDIILSIEDGTNKQELTSAKS
IRYHITK
>Mature_726_residues
TRNKTEKNIQFDFNECLEKAKANELSSLDILNNKDTWDSLSIKQKQRLCVEWVRHGYFSFEEFNDLDCAPELYGLLNEDI
YIVGIKQDPVRLQNIPDDILSTILPVLYEDRNFMDDLIDKACEDITILQSSQELHKKVIELAAHQIWGGKKSIFIRGDTR
FYKDVEECIIESINQGKFVINNENTFLSGQFHYSSGFLAHSPAICMAILRKNPGKLFIVSKDILPLIINDSETMGVIVQA
LRCGEIEMKTIPTSMKNKDICFAALIFNLRNNIFVPEEIREQLDYEEIYYEAMLANPAALKDIPDDMKSKIINRFSHEEF
FQLIQKYHFNCLPYLPDEWVEKIKREVLPKVRTVVVYDPTRYDREIRMSCQLYASRPQYQDQTIVINSEDLNHLLKTLSK
VSEHSSIKLVINGHSSYRSEQLAGLSSQSIVHYLEKYPIIHDLVLSGCSTVKMEVTAQEKEMIKEFIFLINQKSIENNRS
PEEIIDELVANGVFEKGHPEYKEYKKFVPFLQSITVTPEEIEKNLKESLMKLVIDELEKSKKISHSITIKAIPSPLNVNE
TYEKSTRGFVVWNKELYKEGKTGLDSDLRKLEYRNYFFNTIKPPVMAKIYIAKERITKKGENKLNGRNEKAYIIVTKGNS
APELHYYDPAAKIISKLDLKENHSHELLSIVMQTIGLENIKQGINLFNLDDRNQKEKLDDIILSIEDGTNKQELTSAKSI
RYHITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84217; Mature: 84086

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNKTEKNIQFDFNECLEKAKANELSSLDILNNKDTWDSLSIKQKQRLCVEWVRHGYFS
CCCCCCCCCCEECHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
FEEFNDLDCAPELYGLLNEDIYIVGIKQDPVRLQNIPDDILSTILPVLYEDRNFMDDLID
CHHCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHH
KACEDITILQSSQELHKKVIELAAHQIWGGKKSIFIRGDTRFYKDVEECIIESINQGKFV
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEE
INNENTFLSGQFHYSSGFLAHSPAICMAILRKNPGKLFIVSKDILPLIINDSETMGVIVQ
ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHH
ALRCGEIEMKTIPTSMKNKDICFAALIFNLRNNIFVPEEIREQLDYEEIYYEAMLANPAA
HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCHH
LKDIPDDMKSKIINRFSHEEFFQLIQKYHFNCLPYLPDEWVEKIKREVLPKVRTVVVYDP
HHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
TRYDREIRMSCQLYASRPQYQDQTIVINSEDLNHLLKTLSKVSEHSSIKLVINGHSSYRS
CCCCCHHHHHHHEEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
EQLAGLSSQSIVHYLEKYPIIHDLVLSGCSTVKMEVTAQEKEMIKEFIFLINQKSIENNR
HHHHCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCC
SPEEIIDELVANGVFEKGHPEYKEYKKFVPFLQSITVTPEEIEKNLKESLMKLVIDELEK
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SKKISHSITIKAIPSPLNVNETYEKSTRGFVVWNKELYKEGKTGLDSDLRKLEYRNYFFN
HHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHH
TIKPPVMAKIYIAKERITKKGENKLNGRNEKAYIIVTKGNSAPELHYYDPAAKIISKLDL
CCCCCHHEEEEEHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHCC
KENHSHELLSIVMQTIGLENIKQGINLFNLDDRNQKEKLDDIILSIEDGTNKQELTSAKS
CCCCHHHHHHHHHHHHCHHHHHCCCCEECCCCCCHHHHHHHEEEEECCCCCHHHHHHHHC
IRYHITK
EEEEECC
>Mature Secondary Structure 
TRNKTEKNIQFDFNECLEKAKANELSSLDILNNKDTWDSLSIKQKQRLCVEWVRHGYFS
CCCCCCCCCEECHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
FEEFNDLDCAPELYGLLNEDIYIVGIKQDPVRLQNIPDDILSTILPVLYEDRNFMDDLID
CHHCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHH
KACEDITILQSSQELHKKVIELAAHQIWGGKKSIFIRGDTRFYKDVEECIIESINQGKFV
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEE
INNENTFLSGQFHYSSGFLAHSPAICMAILRKNPGKLFIVSKDILPLIINDSETMGVIVQ
ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHH
ALRCGEIEMKTIPTSMKNKDICFAALIFNLRNNIFVPEEIREQLDYEEIYYEAMLANPAA
HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCHH
LKDIPDDMKSKIINRFSHEEFFQLIQKYHFNCLPYLPDEWVEKIKREVLPKVRTVVVYDP
HHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
TRYDREIRMSCQLYASRPQYQDQTIVINSEDLNHLLKTLSKVSEHSSIKLVINGHSSYRS
CCCCCHHHHHHHEEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
EQLAGLSSQSIVHYLEKYPIIHDLVLSGCSTVKMEVTAQEKEMIKEFIFLINQKSIENNR
HHHHCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCC
SPEEIIDELVANGVFEKGHPEYKEYKKFVPFLQSITVTPEEIEKNLKESLMKLVIDELEK
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SKKISHSITIKAIPSPLNVNETYEKSTRGFVVWNKELYKEGKTGLDSDLRKLEYRNYFFN
HHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHH
TIKPPVMAKIYIAKERITKKGENKLNGRNEKAYIIVTKGNSAPELHYYDPAAKIISKLDL
CCCCCHHEEEEEHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHCC
KENHSHELLSIVMQTIGLENIKQGINLFNLDDRNQKEKLDDIILSIEDGTNKQELTSAKS
CCCCHHHHHHHHHHHHCHHHHHCCCCEECCCCCCHHHHHHHEEEEECCCCCHHHHHHHHC
IRYHITK
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA