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The map label for this gene is ctaG [H]

Identifier: 54295721

GI number: 54295721

Start: 3211701

End: 3212243

Strand: Reverse

Name: ctaG [H]

Synonym: lpl2809

Alternate gene names: 54295721

Gene position: 3212243-3211701 (Counterclockwise)

Preceding gene: 54295722

Following gene: 54295720

Centisome position: 96.01

GC content: 37.02

Gene sequence:

>543_bases
ATGATTGAAGAAAAAAAACAGAAAAAACTGCTCACCATATTAACATTATTAGTCTTAGGGATGTTTGCTTTTGGTTTTGC
TCTGGTCCCTATTTATAATAGCCTTTGCAAGAATCTGGGCATCAACGGCAAAACCAAAATGGAGGCCGTTGCTTATGATG
AAGACAAGGCAAAAATTGCAGCAGATAGAGAAGTCTTGGTTGAATTCGTAGCAACCAATAACAGTGGTGTGCCTTGGGCC
TTCTATCCCAAGACAAAAAAAATTAAAGTGCATCCAGGAGAAATTGTAAAGCTGGCATTCTATGCGGAAAATAAAACAGA
CCATACAATGACAGTTCAGGCAATCCCAAGTGTGACACCAGGAATTGCAGCAAAATATTTAAAAAAAACGGAATGTTTTT
GTTTTACTCAACAAACGCTAAATGGCCATGAGGCAATGAATATGCCTTTACTATTCCATTTAGATACGGATTTACCGAAA
AATGTGAATACGGTTACTCTGTCTTATACATTGTTTGATGTGACAGGTAGATCAAGTAATTAG

Upstream 100 bases:

>100_bases
GGTTTGGGAAGGGTCACATGGATTGGAATGGACTTTGCCATCTCCACCACCTTACCATACGTTTACCACTCCACCTGAGA
TTAAATAAAGGTGGAGCTTG

Downstream 100 bases:

>100_bases
GCGTCGTTGATATGTCTACCTTTGCGGCTGGCTTGCCTCGATTTTCTGAACGTTGTTTCTTGAAATCGTGACAATGCAAT
TCACGCTAGCCAAATATCAA

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MIEEKKQKKLLTILTLLVLGMFAFGFALVPIYNSLCKNLGINGKTKMEAVAYDEDKAKIAADREVLVEFVATNNSGVPWA
FYPKTKKIKVHPGEIVKLAFYAENKTDHTMTVQAIPSVTPGIAAKYLKKTECFCFTQQTLNGHEAMNMPLLFHLDTDLPK
NVNTVTLSYTLFDVTGRSSN

Sequences:

>Translated_180_residues
MIEEKKQKKLLTILTLLVLGMFAFGFALVPIYNSLCKNLGINGKTKMEAVAYDEDKAKIAADREVLVEFVATNNSGVPWA
FYPKTKKIKVHPGEIVKLAFYAENKTDHTMTVQAIPSVTPGIAAKYLKKTECFCFTQQTLNGHEAMNMPLLFHLDTDLPK
NVNTVTLSYTLFDVTGRSSN
>Mature_180_residues
MIEEKKQKKLLTILTLLVLGMFAFGFALVPIYNSLCKNLGINGKTKMEAVAYDEDKAKIAADREVLVEFVATNNSGVPWA
FYPKTKKIKVHPGEIVKLAFYAENKTDHTMTVQAIPSVTPGIAAKYLKKTECFCFTQQTLNGHEAMNMPLLFHLDTDLPK
NVNTVTLSYTLFDVTGRSSN

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=179, Percent_Identity=31.8435754189944, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71990692, Length=171, Percent_Identity=34.5029239766082, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6325125, Length=166, Percent_Identity=31.9277108433735, Blast_Score=103, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24581944, Length=170, Percent_Identity=34.7058823529412, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 20067; Mature: 20067

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEEKKQKKLLTILTLLVLGMFAFGFALVPIYNSLCKNLGINGKTKMEAVAYDEDKAKIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
ADREVLVEFVATNNSGVPWAFYPKTKKIKVHPGEIVKLAFYAENKTDHTMTVQAIPSVTP
HHHHHHEEEEECCCCCCCEEECCCCCEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCH
GIAAKYLKKTECFCFTQQTLNGHEAMNMPLLFHLDTDLPKNVNTVTLSYTLFDVTGRSSN
HHHHHHHHHHHEEEEEHHHCCCCHHCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MIEEKKQKKLLTILTLLVLGMFAFGFALVPIYNSLCKNLGINGKTKMEAVAYDEDKAKIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
ADREVLVEFVATNNSGVPWAFYPKTKKIKVHPGEIVKLAFYAENKTDHTMTVQAIPSVTP
HHHHHHEEEEECCCCCCCEEECCCCCEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCH
GIAAKYLKKTECFCFTQQTLNGHEAMNMPLLFHLDTDLPKNVNTVTLSYTLFDVTGRSSN
HHHHHHHHHHHEEEEEHHHCCCCHHCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]