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The map label for this gene is 54295678

Identifier: 54295678

GI number: 54295678

Start: 3165847

End: 3166683

Strand: Reverse

Name: 54295678

Synonym: lpl2766

Alternate gene names: NA

Gene position: 3166683-3165847 (Counterclockwise)

Preceding gene: 54295679

Following gene: 54295677

Centisome position: 94.65

GC content: 39.07

Gene sequence:

>837_bases
ATGATGTGGCGGGTTTTAACTATTGTGGCAGCTGCACTAATGTCCAATCAACTTAAGGCGTTTAGTTGGTCTGATTTATG
GTTTACTCCCAATCAACAAGCTCAACATTTGATGGAAAAGGGACAATTTGCAAAAGCTAAAGATCTTTTTGAGCGCAATG
ACTGGGCTGCAAGCGCAGCATACAGAGCAGGAGATTATGAACAGGCAGCCAAATTATTCAATGAGTTAAAAACGGAACAA
GGCTACTATAATCAGGGAAATGCTTTAGCGCACTTAGGGAAATATGAGGAAGCAATACGAGCATATGACAAAGCCTTGGC
ATTTAATCCAAATAATCAGGATGCTTTATATAATCGACAATTAATCAGCGAATTGTTGAAGAAAGATAAAGAAAAGAAAA
AAAGCCAGAATCAGCAGGATAAGGATCAACAAAACAAAGATCAACAGAACCAGGATCAGCAAAATCAGGACAAGCAAAAC
AAAGATCAACAGAATCAGGATCAGCAAAATCAGGACAAGCAGAACAAAAATCAGCAGAACCAGGATCAGCAAAATCAGGA
CAAGCAGGACAAAAATCAGCAGAACCAGGAACAGCAAAATCAGGACAAGCAAAACAAAGATCAGCAGAACCGGGAACAGC
AAAATAAGGCGCAACAGAATAAAGATCAAAATAAAAAAAATGACAAGCAAGAGGGAGAAATTCAGTCCGAATCGAATCAG
GAGAAGCAACTTGCTAAAGAACAATGGTTGCGATTAATACCTGATGATCCGGGTGGATTAATGAGAGAAAAATTTTTACG
TGATCATTTACGTAGAGAGCGTGGGTGGTATCAATGA

Upstream 100 bases:

>100_bases
ATATCCCATTATGGCGTGATGAAGGCCGCTGGTTCTTGATTCCCGCATTGCTTTTATTATTACCCGTATTTCAGCGAGGT
TGGATGCAAAGGGTGACGGT

Downstream 100 bases:

>100_bases
AGAAATTAACGTTATGGGTTTTATTGAGTTTATTTTCATCATTATCTTTTGCAGAAATCAAAGTCGAACTTGAACCTTCG
CAAGTCACAATGGGAGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Transmembrane Protein; TPR Repeat; Tetratricopeptide Repeat Family; Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MMWRVLTIVAAALMSNQLKAFSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAYRAGDYEQAAKLFNELKTEQ
GYYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRQLISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQN
KDQQNQDQQNQDKQNKNQQNQDQQNQDKQDKNQQNQEQQNQDKQNKDQQNREQQNKAQQNKDQNKKNDKQEGEIQSESNQ
EKQLAKEQWLRLIPDDPGGLMREKFLRDHLRRERGWYQ

Sequences:

>Translated_278_residues
MMWRVLTIVAAALMSNQLKAFSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAYRAGDYEQAAKLFNELKTEQ
GYYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRQLISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQN
KDQQNQDQQNQDKQNKNQQNQDQQNQDKQDKNQQNQEQQNQDKQNKDQQNREQQNKAQQNKDQNKKNDKQEGEIQSESNQ
EKQLAKEQWLRLIPDDPGGLMREKFLRDHLRRERGWYQ
>Mature_278_residues
MMWRVLTIVAAALMSNQLKAFSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAYRAGDYEQAAKLFNELKTEQ
GYYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRQLISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQN
KDQQNQDQQNQDKQNKNQQNQDQQNQDKQDKNQQNQEQQNQDKQNKDQQNREQQNKAQQNKDQNKKNDKQEGEIQSESNQ
EKQLAKEQWLRLIPDDPGGLMREKFLRDHLRRERGWYQ

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33105; Mature: 33105

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA