Click here to switch to the map view.

The map label for this gene is 54295325

Identifier: 54295325

GI number: 54295325

Start: 2740109

End: 2740345

Strand: Direct

Name: 54295325

Synonym: lpl2410

Alternate gene names: NA

Gene position: 2740109-2740345 (Clockwise)

Preceding gene: 54295324

Following gene: 54295326

Centisome position: 81.9

GC content: 35.44

Gene sequence:

>237_bases
ATGTTCCAACCATTTATTACAGATTTTATAAAAAATCGTTCGTTTCAATTTATTTTTGTAATGGGGTTAGTTTCTGATAT
CGCCCTGGCTGGGACGATAAAGCACATAATATTTCTCTTTGGGTTCCCCTATTTAAGCTCTGTTGGTCTCTATTGTCTAA
TGAACCGTAAAAAAACAACTGTTAAAGCAAGAATCAGTGAGCAATACCGGCCAAAGCAGAAAGAAATTTGCAGATGA

Upstream 100 bases:

>100_bases
ACATTGTCATTGGGGATAATGAAGTGTATTCCATTTTTGCTGAGAACAAATGGGCATGTAACTAGTTCCCGTCCCTATCA
TTTGAGTTAATGGATTAAAA

Downstream 100 bases:

>100_bases
ATTCTTAAGGTTTAGTTAATAATTGGTGGCTATAATGGCACAAAGTATTGTTTTGGGTCAGAGTCATTATGTTAACTTAT
CAAGGTAAAGAAATAGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MFQPFITDFIKNRSFQFIFVMGLVSDIALAGTIKHIIFLFGFPYLSSVGLYCLMNRKKTTVKARISEQYRPKQKEICR

Sequences:

>Translated_78_residues
MFQPFITDFIKNRSFQFIFVMGLVSDIALAGTIKHIIFLFGFPYLSSVGLYCLMNRKKTTVKARISEQYRPKQKEICR
>Mature_78_residues
MFQPFITDFIKNRSFQFIFVMGLVSDIALAGTIKHIIFLFGFPYLSSVGLYCLMNRKKTTVKARISEQYRPKQKEICR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9143; Mature: 9143

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQPFITDFIKNRSFQFIFVMGLVSDIALAGTIKHIIFLFGFPYLSSVGLYCLMNRKKTT
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VKARISEQYRPKQKEICR
HHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MFQPFITDFIKNRSFQFIFVMGLVSDIALAGTIKHIIFLFGFPYLSSVGLYCLMNRKKTT
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VKARISEQYRPKQKEICR
HHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA