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The map label for this gene is 54294752

Identifier: 54294752

GI number: 54294752

Start: 2045334

End: 2046560

Strand: Direct

Name: 54294752

Synonym: lpl1829

Alternate gene names: NA

Gene position: 2045334-2046560 (Clockwise)

Preceding gene: 54294751

Following gene: 54294753

Centisome position: 61.13

GC content: 40.26

Gene sequence:

>1227_bases
ATGATCATGAAAACAAAACTATTACCCTTGTTTGATAATCTCAACCACATCCATAAAAACCATGAAAATGTAATATTGCC
TGATACTCGATTTCACAATGATTTCACTTATTGCCTAAGCTTTTTAAAAAGCTACATAGGGAGCGAAGGTACTTTCAACA
GTTACAGAAGAGAAACAGAACGTTTGTTACAGTGGTCATGGCTTGTTAAAAACTCTACTATTAATTCTTTAAGGCGTGAT
GATATTGAACAATACATCCATTTCTGTCAAAACCCTCCTAAAACATGGATTAGTCTAAAAAAAGTTCCACGATTTATAGA
AAAAAATGGTAAACGGACACCTAATGAAGAGTGGCGACCTTTTGTAGTGACACTAAGTAAGGTTTCCAGGAAAAATGGGC
ATCTTGCATCAATAGATCAATTCAAGTTATCTCAGGGAGCTGTGCAAGAAATATTCGCCATCTTAAGTACTCTGTTCAAC
TTTCTAATTGCTGAAGAATATCTGATATCTAATCCAGTTGCCCTTATTAGGCAAAAAAGCAAATTTATTCGCAAAAGGCA
GCATAACGCGCCTGTTAGACGATTAAGTCTGGTTCAATGGGAGGCTGTCCTGAGAGCAGCTGAAAGTTTAGCTGAAGATT
CCCCTGAAAAACATGAACGCACTCGTTTTATTTTAAGTCTGTTATTTGGCATGTATCTTCGTATATCAGAACTTGCTGCC
AGTGAGAGATGGGTACCCAGTATGAATGATTTTGCCAAGGACAGTAATGGCCACTGGTGGTTTACCACCGTGGGGAAAGG
AAATAAGGAACGACAAATTGCGGTAAGCGACGCTATGCTGGAAAGTCTTACCCGTTGGCGATTATTTCTTGGACTTACCC
CTCTTCCATCACCTGCTGATAATTCACCTTTATTACCTAAGCTGCGTGGTCATGGTCCAATGAGTGACACAGCTCCTATA
AGGCGAATTGTTCAGCATTGTTTTGACTTGGCAGAAGAACAACTGCGACTTAATGGTTTATCAGAGGAAGCGGATAATCT
ATCTGCTGCCACGGTGCATTGGCTGCGGCATACTGGTATATCAGAAGATGTAAAAATCAGGCCCAGAGAGCATGTGCGAG
ATGATGCCGGGCATAGTTCAAGTGCTACAACGGACAGGTATATTGATATAGAAAAACAAGCACGTTATCAATCGGCGCGA
AAGAAAATAATTCAGCCCAGCGAATAG

Upstream 100 bases:

>100_bases
ATTATCAACAATAAATCGCGTACTCCATAACTATGCACTTTCACCCTCATGACTTAAATCAGCAATTAGGTTAGGATAAT
GAATTATCAGCAGATAAGTG

Downstream 100 bases:

>100_bases
GGTCTGTTGACATTTCGCTCGCTTGAGTCGAAAAGCCTTGATTTTCGAGCACCGTAGCGGAGCATACATAGAAGTATGTG
AGTAACGGAGCACAGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase; Integrase/Recombinase Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Phage Integrase Family Site Specific Recombinase; Site Specific Recombinase Phage Integrase Family; Integrase / Recombinase Protein; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase; Site-Specific Tyrosine Integrase/Recombinase; Site-Specific Recombinase XerC; Phage Integrase Family; Tyrosine-Based Site-Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MIMKTKLLPLFDNLNHIHKNHENVILPDTRFHNDFTYCLSFLKSYIGSEGTFNSYRRETERLLQWSWLVKNSTINSLRRD
DIEQYIHFCQNPPKTWISLKKVPRFIEKNGKRTPNEEWRPFVVTLSKVSRKNGHLASIDQFKLSQGAVQEIFAILSTLFN
FLIAEEYLISNPVALIRQKSKFIRKRQHNAPVRRLSLVQWEAVLRAAESLAEDSPEKHERTRFILSLLFGMYLRISELAA
SERWVPSMNDFAKDSNGHWWFTTVGKGNKERQIAVSDAMLESLTRWRLFLGLTPLPSPADNSPLLPKLRGHGPMSDTAPI
RRIVQHCFDLAEEQLRLNGLSEEADNLSAATVHWLRHTGISEDVKIRPREHVRDDAGHSSSATTDRYIDIEKQARYQSAR
KKIIQPSE

Sequences:

>Translated_408_residues
MIMKTKLLPLFDNLNHIHKNHENVILPDTRFHNDFTYCLSFLKSYIGSEGTFNSYRRETERLLQWSWLVKNSTINSLRRD
DIEQYIHFCQNPPKTWISLKKVPRFIEKNGKRTPNEEWRPFVVTLSKVSRKNGHLASIDQFKLSQGAVQEIFAILSTLFN
FLIAEEYLISNPVALIRQKSKFIRKRQHNAPVRRLSLVQWEAVLRAAESLAEDSPEKHERTRFILSLLFGMYLRISELAA
SERWVPSMNDFAKDSNGHWWFTTVGKGNKERQIAVSDAMLESLTRWRLFLGLTPLPSPADNSPLLPKLRGHGPMSDTAPI
RRIVQHCFDLAEEQLRLNGLSEEADNLSAATVHWLRHTGISEDVKIRPREHVRDDAGHSSSATTDRYIDIEKQARYQSAR
KKIIQPSE
>Mature_408_residues
MIMKTKLLPLFDNLNHIHKNHENVILPDTRFHNDFTYCLSFLKSYIGSEGTFNSYRRETERLLQWSWLVKNSTINSLRRD
DIEQYIHFCQNPPKTWISLKKVPRFIEKNGKRTPNEEWRPFVVTLSKVSRKNGHLASIDQFKLSQGAVQEIFAILSTLFN
FLIAEEYLISNPVALIRQKSKFIRKRQHNAPVRRLSLVQWEAVLRAAESLAEDSPEKHERTRFILSLLFGMYLRISELAA
SERWVPSMNDFAKDSNGHWWFTTVGKGNKERQIAVSDAMLESLTRWRLFLGLTPLPSPADNSPLLPKLRGHGPMSDTAPI
RRIVQHCFDLAEEQLRLNGLSEEADNLSAATVHWLRHTGISEDVKIRPREHVRDDAGHSSSATTDRYIDIEKQARYQSAR
KKIIQPSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47322; Mature: 47322

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKTKLLPLFDNLNHIHKNHENVILPDTRFHNDFTYCLSFLKSYIGSEGTFNSYRRETE
CCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
RLLQWSWLVKNSTINSLRRDDIEQYIHFCQNPPKTWISLKKVPRFIEKNGKRTPNEEWRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FVVTLSKVSRKNGHLASIDQFKLSQGAVQEIFAILSTLFNFLIAEEYLISNPVALIRQKS
HEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KFIRKRQHNAPVRRLSLVQWEAVLRAAESLAEDSPEKHERTRFILSLLFGMYLRISELAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SERWVPSMNDFAKDSNGHWWFTTVGKGNKERQIAVSDAMLESLTRWRLFLGLTPLPSPAD
HCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NSPLLPKLRGHGPMSDTAPIRRIVQHCFDLAEEQLRLNGLSEEADNLSAATVHWLRHTGI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCC
SEDVKIRPREHVRDDAGHSSSATTDRYIDIEKQARYQSARKKIIQPSE
CCCCEECCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIMKTKLLPLFDNLNHIHKNHENVILPDTRFHNDFTYCLSFLKSYIGSEGTFNSYRRETE
CCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
RLLQWSWLVKNSTINSLRRDDIEQYIHFCQNPPKTWISLKKVPRFIEKNGKRTPNEEWRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FVVTLSKVSRKNGHLASIDQFKLSQGAVQEIFAILSTLFNFLIAEEYLISNPVALIRQKS
HEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KFIRKRQHNAPVRRLSLVQWEAVLRAAESLAEDSPEKHERTRFILSLLFGMYLRISELAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SERWVPSMNDFAKDSNGHWWFTTVGKGNKERQIAVSDAMLESLTRWRLFLGLTPLPSPAD
HCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NSPLLPKLRGHGPMSDTAPIRRIVQHCFDLAEEQLRLNGLSEEADNLSAATVHWLRHTGI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCC
SEDVKIRPREHVRDDAGHSSSATTDRYIDIEKQARYQSARKKIIQPSE
CCCCEECCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA