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The map label for this gene is glnD [H]

Identifier: 54294608

GI number: 54294608

Start: 1877283

End: 1879868

Strand: Direct

Name: glnD [H]

Synonym: lpl1684

Alternate gene names: 54294608

Gene position: 1877283-1879868 (Clockwise)

Preceding gene: 54294607

Following gene: 54294612

Centisome position: 56.11

GC content: 36.62

Gene sequence:

>2586_bases
ATGAAGAACGATAATCGCATCATAAAAAATACGATTAAACAGTTCAAGGAGAAGCTGTGCAGGGACTTTAGCCAAAAAGC
TAATATTACCTCCATCACACGCAAGCTTGCTGTATTTATTGATACTATTTTAATTCAATTATTTATTAAAAATAAGCTAC
ACTTTGGAGATAATTTTTGTCTCCTGGCCCTTGGAAGCTACGGGCGTAGAGAGCTTCAGCTTCACTCAGATATTGACTTG
TTAATATTGCACACTGAAAAAGTAAGCAATATCCAATTACAACGCGCACAAAAATTTATCCAGGATTGTTGGGATGTGGG
GCTGGAGGTAAGTCATCAAATTACCACTGTTTCTTCATGTGCCAATTTGGCCAGTCAGGATTTGAGCGTAATTTCTACCA
TTATGGATATGTTCTTACTGTGTGGGCATGGTGCCTTAATGGAGGAATTAATATACCAAACACACACCTTGCACATGTGG
CCTAGCCATCAATACTTCTTTGCCAAACTTCAGGAACAGCAAAGTCGTTATGCAAAGTATGGAGAAACAGCCTACAACCT
TGAACCTAATATTAAAAATGGTCCAGGTGGATTAAGAGACCTGCAAATTTTGCTAAGCATTAGCAAACGCCATTTTAAAA
TTAAAAAATTAGCCGAGGGAATCGGCTACGGCTTTATTACTGATAAAGAGTATGAAGAATTAAAATACTGCCAGAACTTT
CTTTGGCGCGTTCGATTTGCCTTGCATATGTTAGCAGGAAAGCCTGAGGAGCGCTTGTCATTTGATTATCAGGTTAAATT
AGCTCAATTTTTTGGATATCAAGATCAGTCTCATATCTTGGCCATAGAGCAATTTATGAAAGACTACTTTAAAGTCATCA
AACGCAATAGAGAGCTGAATGAAATGCTCTTGCAATGGTTCAATGAAACCATAGTCTATCATCAAAAGCAAAAAATTATT
CGTCTGGATGATGAATTTCAACTGTCAAACCGATTCATTGAAGTACGCAATAACCGTGTATTTAAACAAAATCCGCAATC
TATATTGAAACTATTCTATTGGCTTGTTAAACGCCCTGACATAGAAGGAGTAAGGGCAAGCACAATAAGATTAATTAGAG
AATCATTATTTTTAATGGGCAAACGCTTTAGAGAATCAAAAGAAACCGCTAATATATTTGTCAACATATTCAGAACTGGT
AATGACCCCTACGATGCATTACAAAGAATGAATAGATATGGTGTTCTAGCGCACTATCTTGATTGTTTTGCTACAGTCAC
TGGACAAATGCAGTATGATTTATTCCATGCCTATACTGTTGATCAGCATACACTATTTGTGATCCGTAATATATCTCGCT
TTAAAAAGAACGAATATGCTAAACAATTTCCTTTATGCGCCAAAATCATTACTGCTTTAGAGAAGCCCGAAATTTTGTAT
CTCGGCGCTTTATTCCACGACATTGCCAAAGGTCGGGGAGGAGATCATTCTGAATTAGGAGCAATTGAGGCACAACAATT
TACACAACGCCACTATATGGAGGCAGAAGATAGCAAATTGATTGTTTGGCTTGTTCGCTACCATTTACTCATGTCACAAA
CTGCTCAGCGTAAAGATATTTATGATCCTAAAACCATTGAGCAATTCTGCCAACTTCTACCTCATGCAAAGTATTTGGAT
TATCTTTATTTACTCACAGTAGCAGATATTTGCGGTACAAATCCTACTCTTTGGAATGCCTGGAAAGATTCATTACTTAA
AGAATTATATCATGCAGCAAAAACAAGACTTCATAAACAACAAGAGTTGCTTGATGAAGCAGCTCTGATATCTATTCGTA
AACAATACGCTATGGATATATTAATTTCAGATGGGATATCCTCCAGAGTCATACAGGATTTATGGAGCCAATTTAAGGGA
AAATATTTTCTTCATGAATCTCCTGAGGTTATAGCCAGACACACCAAGGCCATACTGAACAGCAAACAATTTCCAGTGGT
AATAATTATGCCGCATCACAGTCAGGGTGGAACCGAAGTATTTATCTACATGCCACATAAAGATGAGAGATTTACTATCA
CCACTTCAGTATTAAGCAATCATCACGTTACTATACAGGAAGCAGCAATTATTACTTGTGATAATCAATTTGATCTGGAT
ACTTATATTATTTTAGATGAAAACAATCAGGCTTTTTTGAATGAACAACGTGCCAGAGACATCCAAAAAAGTCTATGTGA
TCATCTGGCCAATACAGGACGCCTCCCGGCTGTTTCTCGCAGAAGATTATCCAGAGCATTGACTCATTTTAATGTCAAAA
CACAAATTAACTTTATTGATGACAATACGAATCATCAAACCCAACTATTTCTCGTTACCAATGACAGGCCTGGACTTTTG
GCGACTATAAGTCGTGTGTTTCTTACACTAAACATTCATTTACATAATGCAAAAATTGCTACGGCTGGTGAGCGGGTAGA
AGATATGTTTTACATCTCCAACCAGACAGGTTATTCCCTGAATCATGAGGAAAAAACAATTTTAAAAGAAAAATTAATTT
TGGAAATTTCTAAAAGCAAGTATTAA

Upstream 100 bases:

>100_bases
GATCATTGGACTGTCGTTACCAAAGATCATAGCCTTTCAGCTCAATGGGAGCACACGCTTTTGGTAACTGATACAGGTGT
TGAAATTCTGACTTTGCGTA

Downstream 100 bases:

>100_bases
GAAGTATGCCAAGATAAATTACTAGCGAAGCTTTCTGAAAAAATCTGACAGCAATTGAGAACACTCAGCCTGCATAATGC
CTTCATCTATTAATACCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 861; Mature: 861

Protein sequence:

>861_residues
MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL
LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW
PSHQYFFAKLQEQQSRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF
LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII
RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTG
NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY
LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHAKYLD
YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKG
KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD
TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL
ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY

Sequences:

>Translated_861_residues
MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL
LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW
PSHQYFFAKLQEQQSRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF
LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII
RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTG
NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY
LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHAKYLD
YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKG
KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD
TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL
ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY
>Mature_861_residues
MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL
LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW
PSHQYFFAKLQEQQSRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF
LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII
RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTG
NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY
LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHAKYLD
YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKG
KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD
TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL
ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=848, Percent_Identity=37.5, Blast_Score=596, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005105
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR013546 [H]

Pfam domain/function: PF03445 DUF294; PF08335 GlnD_UR_UTase [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 100672; Mature: 100672

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFC
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LLALGSYGRRELQLHSDIDLLILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSC
EEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQSRYAKY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHC
GETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF
CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELN
HHHHHHHHHHHCCCCHHHCCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
EMLLQWFNETIVYHQKQKIIRLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPD
HHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCC
IEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTGNDPYDALQRMNRYGVLAHYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
DCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY
HHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE
LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDI
HHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
YDPKTIEQFCQLLPHAKYLDYLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQ
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKGKYFLHESPEVIARHTKAILN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHC
SKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD
CCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHCCCCEEEEEEEEEEECCCCCCE
TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFID
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEE
DNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSL
CCCCCEEEEEEEECCCCCHHHHHHHHHEEEEEEEECCEEECCHHHHHHEEEEECCCCCCC
NHEEKTILKEKLILEISKSKY
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFC
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LLALGSYGRRELQLHSDIDLLILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSC
EEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQSRYAKY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHC
GETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF
CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELN
HHHHHHHHHHHCCCCHHHCCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
EMLLQWFNETIVYHQKQKIIRLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPD
HHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCC
IEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTGNDPYDALQRMNRYGVLAHYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
DCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY
HHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE
LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDI
HHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
YDPKTIEQFCQLLPHAKYLDYLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQ
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKGKYFLHESPEVIARHTKAILN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHC
SKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD
CCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHCCCCEEEEEEEEEEECCCCCCE
TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFID
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEE
DNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSL
CCCCCEEEEEEEECCCCCHHHHHHHHHEEEEEEEECCEEECCHHHHHHEEEEECCCCCCC
NHEEKTILKEKLILEISKSKY
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA