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The map label for this gene is 54294583

Identifier: 54294583

GI number: 54294583

Start: 1851261

End: 1851980

Strand: Reverse

Name: 54294583

Synonym: lpl1659

Alternate gene names: NA

Gene position: 1851980-1851261 (Counterclockwise)

Preceding gene: 54294586

Following gene: 54294582

Centisome position: 55.35

GC content: 36.67

Gene sequence:

>720_bases
ATGTATGAGAATTTATTGGTTGGATGCCATGAGGAATGGAAAGAGATTCTGATGAAAGCATTGAATACAATGGAGAGTGA
TTACTTAAAACAAATACAAGAGGATGGCCATTGGTTACCTGGACTAAATCAGTTATTTTCTGCTTTTAGTCTGCCTTTGA
GCCAGACACAATATATTCTTTTAGGCGAGTCTCCATATCCACGCAAAATTTCTGCTAATGGGTATGCTTTCTGGGATAAT
TCTGTAGGTTTATTGTGGAGCTCCACAGGGCTAAGTAAGGAAGTTAATCGAGCAACCTCACTGCGCAACTGGATTAAAAC
GTTATTGATCGCTCGCGGTGATTTGCATGGAAATACCTCGCAAGAAGCGATCGCCAAGATAAATAAATCATGTCTGGTAC
AAACTGCGGAAGATTTTTTTAAAGGAATGATGAAAAAGGGAATTTTATTATTGAATGCTTCCCTGGTATACAGTAAAGGT
AAGGTTCCGTATCACGCGCGTCATTGGAAGCCATTTATGCAAAATTTATTTGAGCAATTGGCTATCAGGAAGCCTGATGT
GCAATTAATCTTATTTGGTAAAATTGCTGAGAAAATACCCGCAAATAAATTATTGATAGGACTGGTTTCAGAACACCCAT
ATAATGTAAGCTTTATTACTAATCAACGTGTTATAGAATTCTTTAAACCAATGGATTTATTGTCTTATGAATCAAATTGA

Upstream 100 bases:

>100_bases
AGTGTTAAAGTGGCTGAAAACCTGATTTTAAAACATAGGTAATTATCAAAATACCTCAATTTGAAAATTGAATTATCATG
ACGGAAGGGTAAAAATTAAG

Downstream 100 bases:

>100_bases
ATCGACTATTGCTATTGAAGAAGTACATAAATTTGCCCAACTTGCAAATGATTGGTGGGATACTAATGGTCCTCTCAGAA
CTTTGCATGATATCAATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MYENLLVGCHEEWKEILMKALNTMESDYLKQIQEDGHWLPGLNQLFSAFSLPLSQTQYILLGESPYPRKISANGYAFWDN
SVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLHGNTSQEAIAKINKSCLVQTAEDFFKGMMKKGILLLNASLVYSKG
KVPYHARHWKPFMQNLFEQLAIRKPDVQLILFGKIAEKIPANKLLIGLVSEHPYNVSFITNQRVIEFFKPMDLLSYESN

Sequences:

>Translated_239_residues
MYENLLVGCHEEWKEILMKALNTMESDYLKQIQEDGHWLPGLNQLFSAFSLPLSQTQYILLGESPYPRKISANGYAFWDN
SVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLHGNTSQEAIAKINKSCLVQTAEDFFKGMMKKGILLLNASLVYSKG
KVPYHARHWKPFMQNLFEQLAIRKPDVQLILFGKIAEKIPANKLLIGLVSEHPYNVSFITNQRVIEFFKPMDLLSYESN
>Mature_239_residues
MYENLLVGCHEEWKEILMKALNTMESDYLKQIQEDGHWLPGLNQLFSAFSLPLSQTQYILLGESPYPRKISANGYAFWDN
SVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLHGNTSQEAIAKINKSCLVQTAEDFFKGMMKKGILLLNASLVYSKG
KVPYHARHWKPFMQNLFEQLAIRKPDVQLILFGKIAEKIPANKLLIGLVSEHPYNVSFITNQRVIEFFKPMDLLSYESN

Specific function: Unknown

COG id: COG0692

COG function: function code L; Uracil DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27327; Mature: 27327

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYENLLVGCHEEWKEILMKALNTMESDYLKQIQEDGHWLPGLNQLFSAFSLPLSQTQYIL
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
LGESPYPRKISANGYAFWDNSVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLHGNTS
ECCCCCCCEECCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QEAIAKINKSCLVQTAEDFFKGMMKKGILLLNASLVYSKGKVPYHARHWKPFMQNLFEQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHEEEECCCCCCCHHHHHHHHHHHHHHH
AIRKPDVQLILFGKIAEKIPANKLLIGLVSEHPYNVSFITNQRVIEFFKPMDLLSYESN
HCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MYENLLVGCHEEWKEILMKALNTMESDYLKQIQEDGHWLPGLNQLFSAFSLPLSQTQYIL
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
LGESPYPRKISANGYAFWDNSVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLHGNTS
ECCCCCCCEECCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QEAIAKINKSCLVQTAEDFFKGMMKKGILLLNASLVYSKGKVPYHARHWKPFMQNLFEQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHEEEECCCCCCCHHHHHHHHHHHHHHH
AIRKPDVQLILFGKIAEKIPANKLLIGLVSEHPYNVSFITNQRVIEFFKPMDLLSYESN
HCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA