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The map label for this gene is 54294545

Identifier: 54294545

GI number: 54294545

Start: 1796156

End: 1797079

Strand: Reverse

Name: 54294545

Synonym: lpl1621

Alternate gene names: NA

Gene position: 1797079-1796156 (Counterclockwise)

Preceding gene: 54294550

Following gene: 54294544

Centisome position: 53.71

GC content: 36.58

Gene sequence:

>924_bases
ATGACCTCTAACAAGTGCGATATTGTCCTACTAACACAGAAGGATTTTATAGACCCGGCCGATATTACTCCCTACATTCA
AAATGTGCTAACAGAAGATCGATTATTAACCGAAGCTCTGGAGCAAAAGGGATTAAAAGTTAAACGAACTCATTGGGATA
ATCGAGAATATAATTGGTCAGAGACTAGATATGCACTGTTTCGTGCCACCTGGGATTATTTTCATCGTTATGACGAGTTT
CATCTCTGGCTAAATGATTGCTCAAAAAGAATTCAATTTATAAATCCGATTTCTATTATTCAGTGGAATATTGATAAACA
TTATTTGAGTGATATGCAGCAAAAAGGAATTAATATCCCTCCTACTTTATTTTTAAAAAGGGGGAGGCTAAATATCTTAA
ATAATTTAATGAAGGAATCGGGATGGAAGAAAGCGATACTAAAACCTGTAATTGCAGGCGGAGCACGCCATACTTATTTA
TTTGATCAGGATTCTGCGGATCATTATCAAGATGTATTTGAATCATTAATTAACAATGAGTCGATGTTACTCCAGGAATT
TCAGGAGAATATTGTAAATAAAGGAGAAGTCTCTTTTATGGTATTTGGGGGTAGATATAGCCATTCTATACTAAAAAAAG
CAAAATCTGGCGATTTTAGAGTACAGGATGATTTCGGTGGGACTGTACATCCTTATGAGGCATCTCAAGAAGAAAGGGAG
TTTGTTGAGAATGTCATAGCTCAATGCGATGAGTTACCCGTGTATGCACGTGTTGATGTCATGTGGGATAACAATAATAA
ATTGTGTTTGAGTGAGCTGGAAATGATAGAACCTGAGCTTTGGTTCAGAGAAAGCAGTCAAGCAGCGTCTGCTATGGCTG
ATGCAGTATGCAAACACATATCAGGAGTCAGTGAATATAAATAA

Upstream 100 bases:

>100_bases
TAATTTGATTAAATTAGCAGGTTGATTTGCGATGGTGGTATATAGATTTAGTTTAAAAAGATAAGTATTCTTTTATCATT
TGATACGGATTGTTTCTATC

Downstream 100 bases:

>100_bases
ACGCTCTAAGACACAACAATAGTCAAAGACAGGGAAAAAATATGAACACACGGATAGTTTCATTATTAGTTGTTTTTATG
GCAAGTGCTAATTTGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTSNKCDIVLLTQKDFIDPADITPYIQNVLTEDRLLTEALEQKGLKVKRTHWDNREYNWSETRYALFRATWDYFHRYDEF
HLWLNDCSKRIQFINPISIIQWNIDKHYLSDMQQKGINIPPTLFLKRGRLNILNNLMKESGWKKAILKPVIAGGARHTYL
FDQDSADHYQDVFESLINNESMLLQEFQENIVNKGEVSFMVFGGRYSHSILKKAKSGDFRVQDDFGGTVHPYEASQEERE
FVENVIAQCDELPVYARVDVMWDNNNKLCLSELEMIEPELWFRESSQAASAMADAVCKHISGVSEYK

Sequences:

>Translated_307_residues
MTSNKCDIVLLTQKDFIDPADITPYIQNVLTEDRLLTEALEQKGLKVKRTHWDNREYNWSETRYALFRATWDYFHRYDEF
HLWLNDCSKRIQFINPISIIQWNIDKHYLSDMQQKGINIPPTLFLKRGRLNILNNLMKESGWKKAILKPVIAGGARHTYL
FDQDSADHYQDVFESLINNESMLLQEFQENIVNKGEVSFMVFGGRYSHSILKKAKSGDFRVQDDFGGTVHPYEASQEERE
FVENVIAQCDELPVYARVDVMWDNNNKLCLSELEMIEPELWFRESSQAASAMADAVCKHISGVSEYK
>Mature_306_residues
TSNKCDIVLLTQKDFIDPADITPYIQNVLTEDRLLTEALEQKGLKVKRTHWDNREYNWSETRYALFRATWDYFHRYDEFH
LWLNDCSKRIQFINPISIIQWNIDKHYLSDMQQKGINIPPTLFLKRGRLNILNNLMKESGWKKAILKPVIAGGARHTYLF
DQDSADHYQDVFESLINNESMLLQEFQENIVNKGEVSFMVFGGRYSHSILKKAKSGDFRVQDDFGGTVHPYEASQEEREF
VENVIAQCDELPVYARVDVMWDNNNKLCLSELEMIEPELWFRESSQAASAMADAVCKHISGVSEYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35895; Mature: 35764

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNKCDIVLLTQKDFIDPADITPYIQNVLTEDRLLTEALEQKGLKVKRTHWDNREYNWS
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCH
ETRYALFRATWDYFHRYDEFHLWLNDCSKRIQFINPISIIQWNIDKHYLSDMQQKGINIP
HHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCC
PTLFLKRGRLNILNNLMKESGWKKAILKPVIAGGARHTYLFDQDSADHYQDVFESLINNE
HHHEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCH
SMLLQEFQENIVNKGEVSFMVFGGRYSHSILKKAKSGDFRVQDDFGGTVHPYEASQEERE
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCEECCCCCCHHHHH
FVENVIAQCDELPVYARVDVMWDNNNKLCLSELEMIEPELWFRESSQAASAMADAVCKHI
HHHHHHHHHHCCCEEEEEEEEECCCCCEEHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHH
SGVSEYK
CCHHCCC
>Mature Secondary Structure 
TSNKCDIVLLTQKDFIDPADITPYIQNVLTEDRLLTEALEQKGLKVKRTHWDNREYNWS
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCH
ETRYALFRATWDYFHRYDEFHLWLNDCSKRIQFINPISIIQWNIDKHYLSDMQQKGINIP
HHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCC
PTLFLKRGRLNILNNLMKESGWKKAILKPVIAGGARHTYLFDQDSADHYQDVFESLINNE
HHHEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCH
SMLLQEFQENIVNKGEVSFMVFGGRYSHSILKKAKSGDFRVQDDFGGTVHPYEASQEERE
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCEECCCCCCHHHHH
FVENVIAQCDELPVYARVDVMWDNNNKLCLSELEMIEPELWFRESSQAASAMADAVCKHI
HHHHHHHHHHCCCEEEEEEEEECCCCCEEHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHH
SGVSEYK
CCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA