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The map label for this gene is 54294508

Identifier: 54294508

GI number: 54294508

Start: 1758826

End: 1760220

Strand: Direct

Name: 54294508

Synonym: lpl1579

Alternate gene names: NA

Gene position: 1758826-1760220 (Clockwise)

Preceding gene: 54294504

Following gene: 54294511

Centisome position: 52.57

GC content: 47.03

Gene sequence:

>1395_bases
ATGAAAACAAAAATAAACCTAAATAACCCAATCCTCTTCGACAAAGAAAAATTAGAATTAAATTTATCCAATCAAAAACT
AAATGCTCAAGACATTAAAGAGCTTATTGTTCCTTTTTTAAATACAAATCCTGAAATTAAATCGCTTAATCTGCGCAACA
ACAACATTGGGGATGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGCGCGCAAACAACATT
GGGGATGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGAGCTACAACAACATTGGGGCAGA
GGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGCGCGCAAACAACATTGGGGATGAGGGTGCTA
AGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGCGCTACAACAACATTGGGGATGAGGGTGCTAAGGCGCTT
GCTGCCAATCAAAGCCTCAGCACGCTTAATCTGCGCAACAACAACATTGGGGATGAGGGTGCTAAGGCGCTTGCTGCCAA
TCAAAGCCTCAGCACGCTTAATCTGAGCTACAACAACATTAGGGCAGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCC
TCAGCACGCTTAATCTGCGCTACAACAACATTAGGGCAGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACG
CTTAATCTGAGCTACAACAACATTGGGGATGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCT
GAGCTACAACAACATTGGGGATGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGAGCTACA
ACAACATTGGGGATGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGAGCTACAACAACATT
AGGGCAGAGGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGAGCTACAACAACATTGGGGATGA
GGGTGCTAAGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGAGCTACAACAACATTAGGGCAGAGGGTGCTA
AGGCGCTTGCTGCCAATCAAAGCCTCAGCACGCTTAATCTGAGCTACAACAACATTGGGGATGAGGGTGCTAAGGCGCTG
AACGAAACAGATCCTCTTAAACGAGCCAATTACGGAAGAGAGGCTGGAATGGATACCGGAGTTCCTTCCCTAGCTAGATT
AAGCCTTTTCGCAGTTAAGAAAGAATTAGAAACAGAAAAATATACGGAAGAAGAAAAAAAAGAAATTTTGGAAATCATCC
CTTCTCATTTCAATGTTCTGAAACAAAAAATCTAA

Upstream 100 bases:

>100_bases
AAACCCAATTTTAACCACTTTTTTATCAGTGAGACTATTTTTACTCTACCTTGATGCATTACACTCCTCCCCTTGAAAAC
AACGATGAGTGCTATTTATT

Downstream 100 bases:

>100_bases
ATACTTGGGGCTCTGCCCCAATCCCCGGGATATTTAAAGACGTGATGGGGTTGGGTTGTTTTTATTCAGAAGCAACTATA
AACTTAAATCACGGTACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Leucine-Rich Repeat-Containing Protein; GALA Protein; Type III Effector; Miro-Like Protein; Leucine-Rich Repeat Protein; Leucine-Rich Repeat Ribonuclease Inhibitor Subtype; Leucine-Rich Repeat-Containing Ribonuclease Inhibitor; Adenylate Cyclase Regulatory Protein; Leucine-Rich Repeat Cysteine-Containing Subtype; Serine/Threonine Protein Kinase-Related Protein; Type III Effector Gala6 Protein; Guanosine Polyphosphate Pyrophosphohydrolase/Synthetase; InteRNAlin A Protein; Type III Effector Protein; AAA ATPase Family Protein; Cyclin Domain-Containing Protein

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MKTKINLNNPILFDKEKLELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEGAKALAANQSLSTLNLRANNI
GDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKAL
AANQSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLST
LNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNI
RAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKAL
NETDPLKRANYGREAGMDTGVPSLARLSLFAVKKELETEKYTEEEKKEILEIIPSHFNVLKQKI

Sequences:

>Translated_464_residues
MKTKINLNNPILFDKEKLELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEGAKALAANQSLSTLNLRANNI
GDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKAL
AANQSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLST
LNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNI
RAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKAL
NETDPLKRANYGREAGMDTGVPSLARLSLFAVKKELETEKYTEEEKKEILEIIPSHFNVLKQKI
>Mature_464_residues
MKTKINLNNPILFDKEKLELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEGAKALAANQSLSTLNLRANNI
GDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKAL
AANQSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLST
LNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNI
RAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKAL
NETDPLKRANYGREAGMDTGVPSLARLSLFAVKKELETEKYTEEEKKEILEIIPSHFNVLKQKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118918429, Length=443, Percent_Identity=39.7291196388262, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI168986655, Length=258, Percent_Identity=32.9457364341085, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI62912472, Length=348, Percent_Identity=29.5977011494253, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI62912470, Length=348, Percent_Identity=29.5977011494253, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4504379, Length=363, Percent_Identity=27.8236914600551, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI11545912, Length=199, Percent_Identity=40.7035175879397, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI21955154, Length=318, Percent_Identity=29.559748427673, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI229577123, Length=228, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI5174617, Length=225, Percent_Identity=36.8888888888889, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI289666780, Length=283, Percent_Identity=32.1554770318021, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI291463280, Length=321, Percent_Identity=28.9719626168224, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI291463278, Length=321, Percent_Identity=28.9719626168224, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI8923473, Length=321, Percent_Identity=28.9719626168224, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI291463275, Length=321, Percent_Identity=28.9719626168224, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI110624785, Length=328, Percent_Identity=30.4878048780488, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI226342931, Length=390, Percent_Identity=27.9487179487179, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42822874, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42822872, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42822870, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42822868, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42822866, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42822864, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI21361547, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI42794608, Length=386, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI226342933, Length=390, Percent_Identity=27.9487179487179, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI62912474, Length=252, Percent_Identity=31.3492063492063, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI158321897, Length=386, Percent_Identity=26.9430051813472, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI116268109, Length=305, Percent_Identity=29.8360655737705, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI157694513, Length=364, Percent_Identity=26.0989010989011, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI289666778, Length=234, Percent_Identity=32.9059829059829, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI226342935, Length=296, Percent_Identity=30.0675675675676, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI289666782, Length=202, Percent_Identity=32.1782178217822, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI21450705, Length=184, Percent_Identity=35.3260869565217, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI54607118, Length=309, Percent_Identity=31.7152103559871, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71984630, Length=412, Percent_Identity=24.5145631067961, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17542470, Length=370, Percent_Identity=26.4864864864865, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17542472, Length=345, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71980576, Length=372, Percent_Identity=27.4193548387097, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17551022, Length=354, Percent_Identity=28.5310734463277, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508779, Length=278, Percent_Identity=28.4172661870504, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32567224, Length=281, Percent_Identity=30.6049822064057, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI32567222, Length=281, Percent_Identity=30.6049822064057, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21358607, Length=351, Percent_Identity=28.2051282051282, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI28574432, Length=401, Percent_Identity=25.1870324189526, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281363494, Length=399, Percent_Identity=26.0651629072682, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI17136634, Length=315, Percent_Identity=30.4761904761905, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161077058, Length=361, Percent_Identity=28.5318559556787, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI281363846, Length=312, Percent_Identity=29.8076923076923, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281360329, Length=383, Percent_Identity=27.9373368146214, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161076373, Length=383, Percent_Identity=27.9373368146214, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360325, Length=383, Percent_Identity=27.9373368146214, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24657983, Length=361, Percent_Identity=24.0997229916898, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24657976, Length=361, Percent_Identity=24.0997229916898, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24657968, Length=361, Percent_Identity=24.0997229916898, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24657961, Length=361, Percent_Identity=24.0997229916898, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221500776, Length=368, Percent_Identity=24.7282608695652, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24667524, Length=412, Percent_Identity=25.2427184466019, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24664561, Length=402, Percent_Identity=25.8706467661692, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24662159, Length=355, Percent_Identity=25.9154929577465, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49131; Mature: 49131

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKINLNNPILFDKEKLELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEG
CCCEEECCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH
AKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLST
HHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCEE
LNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKALAANQSLSTLNLRNNNIGDEG
EEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCHH
AKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLST
HHHHHCCCCCEEEEEECCCEECCCCHHHHCCCCCEEEEEEECCEECCCCHHHCCCCCCEE
LNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEG
EEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHH
AKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLST
HHHHHCCCCCEEEEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCEE
LNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALNETDPLKRANYGREAGMDTG
EEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCC
VPSLARLSLFAVKKELETEKYTEEEKKEILEIIPSHFNVLKQKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTKINLNNPILFDKEKLELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEG
CCCEEECCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH
AKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLST
HHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCEE
LNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKALAANQSLSTLNLRNNNIGDEG
EEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCHH
AKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLST
HHHHHCCCCCEEEEEECCCEECCCCHHHHCCCCCEEEEEEECCEECCCCHHHCCCCCCEE
LNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEG
EEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHH
AKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLST
HHHHHCCCCCEEEEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCEE
LNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALNETDPLKRANYGREAGMDTG
EEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCC
VPSLARLSLFAVKKELETEKYTEEEKKEILEIIPSHFNVLKQKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA