Click here to switch to the map view.

The map label for this gene is 54294504

Identifier: 54294504

GI number: 54294504

Start: 1754293

End: 1755444

Strand: Direct

Name: 54294504

Synonym: lpl1573

Alternate gene names: NA

Gene position: 1754293-1755444 (Clockwise)

Preceding gene: 54294501

Following gene: 54294508

Centisome position: 52.43

GC content: 37.93

Gene sequence:

>1152_bases
ATGTTGAAGAATATCACACGAGCTTTGTCTTTGTCATTGTTAATAAGCCATAACATCTGCGCCAATGAAGCATCTTCTAT
CGATACAGTATCTCAACCAACAACCATTCAATTTTTAGAAAAATTTGGTGCAGGATTTGCCAATCTGGAACATAAAAATC
TGGGGGATAGAGTTCAACTTTATTTACCAGGCCATAACAGCAAGACTGGTATTGTAAAACTGAGATTACCCAATGGGAGT
AAACTAAGTTATGGTGAGATCGTGATGTACGGTGGTGATATGTTTGGAAATCCGGCAAAACCCATATCCAATTGCTCTGC
GAAAAACAGGTTAGCTTGTTTCCAGGCGCAGTTTGACGCTCTGGGGACTTTAGGTAACAAGCAAGACAAGCGTTGCTCTA
ACCCACTTAATCAGATAACCCATCTTGATCGGTTTTTTACCAATTTGGCTGAAGAGATCGAAAAATCAAAACAAAACGGA
ACAAATGATTGGGATTATTATAATCAGCACGACTCGGCTATTAGCAAGGAATTAAACAAATTGACTTGTGGTGGAAGTAT
AATCAGTGGTTTTATACCCTTTGGCAATTATATTAAATTAGCTGAAGTCAACTATGATCACTTTGTTCCTGATTCACTTG
TAGCCTATAAAACAGGCCATAGATTTGCTTTGGAAACAGCATTAAAAGCTTATGAGAAAAAGCAGCAGGGACTTATCGAT
GAAGCTCACAAGCTCCTTGAATTAGCCTATGCTCAAAACGCCTTTGCAAATCATTACTTAACTGATTCTTTTTCTGCAGG
GCACATGCGTACTCCAAGAAGAGCCATAGGACATGATATATTACTGCCTTCTGTTTTAAATCTTCTTATCGCCAATTTGA
TGCATAATGAAGATAATCAACATGGGTTAAATGTAGTGAATTATGAAGGAATAAGTTGGCTTGCCTATGGAGATGGCTAT
TTATACAAACCTGAAGCCGAATTACAAAGAGTGGTCATCTTAGACGCCATGCAACGTTCTGCAGACAGTATCCATAGTAC
TTTTATGAATGGAGTTATCCCTGAACACTACCAATCGTTGTTGTTATTGCTATTGGTAAACGTGAACGTAATGCAGTATA
TAAGTCCGCAGAAAAGCGTAAATAATTTCTAA

Upstream 100 bases:

>100_bases
ATCAATTACAAAATTCTCATGCTACATTTTTAGAATGTTGTATGGATATAAAAAACAAAAAATGCCCAAATAAAGGGCCG
AATAATCAAGGGAATGCATA

Downstream 100 bases:

>100_bases
AATATCCAAAATATTTTTTTTCTCTTAATTTTCTCTGTCTTTTCGCTACTATTATGTTCAAGTAACTTTTGACTACTCTT
TAGCGTTTCTAAAAGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phospholipase C; Phosphatidylcholine Hydrolyzing Phospholipase

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MLKNITRALSLSLLISHNICANEASSIDTVSQPTTIQFLEKFGAGFANLEHKNLGDRVQLYLPGHNSKTGIVKLRLPNGS
KLSYGEIVMYGGDMFGNPAKPISNCSAKNRLACFQAQFDALGTLGNKQDKRCSNPLNQITHLDRFFTNLAEEIEKSKQNG
TNDWDYYNQHDSAISKELNKLTCGGSIISGFIPFGNYIKLAEVNYDHFVPDSLVAYKTGHRFALETALKAYEKKQQGLID
EAHKLLELAYAQNAFANHYLTDSFSAGHMRTPRRAIGHDILLPSVLNLLIANLMHNEDNQHGLNVVNYEGISWLAYGDGY
LYKPEAELQRVVILDAMQRSADSIHSTFMNGVIPEHYQSLLLLLLVNVNVMQYISPQKSVNNF

Sequences:

>Translated_383_residues
MLKNITRALSLSLLISHNICANEASSIDTVSQPTTIQFLEKFGAGFANLEHKNLGDRVQLYLPGHNSKTGIVKLRLPNGS
KLSYGEIVMYGGDMFGNPAKPISNCSAKNRLACFQAQFDALGTLGNKQDKRCSNPLNQITHLDRFFTNLAEEIEKSKQNG
TNDWDYYNQHDSAISKELNKLTCGGSIISGFIPFGNYIKLAEVNYDHFVPDSLVAYKTGHRFALETALKAYEKKQQGLID
EAHKLLELAYAQNAFANHYLTDSFSAGHMRTPRRAIGHDILLPSVLNLLIANLMHNEDNQHGLNVVNYEGISWLAYGDGY
LYKPEAELQRVVILDAMQRSADSIHSTFMNGVIPEHYQSLLLLLLVNVNVMQYISPQKSVNNF
>Mature_383_residues
MLKNITRALSLSLLISHNICANEASSIDTVSQPTTIQFLEKFGAGFANLEHKNLGDRVQLYLPGHNSKTGIVKLRLPNGS
KLSYGEIVMYGGDMFGNPAKPISNCSAKNRLACFQAQFDALGTLGNKQDKRCSNPLNQITHLDRFFTNLAEEIEKSKQNG
TNDWDYYNQHDSAISKELNKLTCGGSIISGFIPFGNYIKLAEVNYDHFVPDSLVAYKTGHRFALETALKAYEKKQQGLID
EAHKLLELAYAQNAFANHYLTDSFSAGHMRTPRRAIGHDILLPSVLNLLIANLMHNEDNQHGLNVVNYEGISWLAYGDGY
LYKPEAELQRVVILDAMQRSADSIHSTFMNGVIPEHYQSLLLLLLVNVNVMQYISPQKSVNNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42785; Mature: 42785

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNITRALSLSLLISHNICANEASSIDTVSQPTTIQFLEKFGAGFANLEHKNLGDRVQL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEE
YLPGHNSKTGIVKLRLPNGSKLSYGEIVMYGGDMFGNPAKPISNCSAKNRLACFQAQFDA
EECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
LGTLGNKQDKRCSNPLNQITHLDRFFTNLAEEIEKSKQNGTNDWDYYNQHDSAISKELNK
HHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LTCGGSIISGFIPFGNYIKLAEVNYDHFVPDSLVAYKTGHRFALETALKAYEKKQQGLID
HCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHCHHH
EAHKLLELAYAQNAFANHYLTDSFSAGHMRTPRRAIGHDILLPSVLNLLIANLMHNEDNQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HGLNVVNYEGISWLAYGDGYLYKPEAELQRVVILDAMQRSADSIHSTFMNGVIPEHYQSL
CCCEEEEECCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLLLLVNVNVMQYISPQKSVNNF
HHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MLKNITRALSLSLLISHNICANEASSIDTVSQPTTIQFLEKFGAGFANLEHKNLGDRVQL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEE
YLPGHNSKTGIVKLRLPNGSKLSYGEIVMYGGDMFGNPAKPISNCSAKNRLACFQAQFDA
EECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
LGTLGNKQDKRCSNPLNQITHLDRFFTNLAEEIEKSKQNGTNDWDYYNQHDSAISKELNK
HHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LTCGGSIISGFIPFGNYIKLAEVNYDHFVPDSLVAYKTGHRFALETALKAYEKKQQGLID
HCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHCHHH
EAHKLLELAYAQNAFANHYLTDSFSAGHMRTPRRAIGHDILLPSVLNLLIANLMHNEDNQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HGLNVVNYEGISWLAYGDGYLYKPEAELQRVVILDAMQRSADSIHSTFMNGVIPEHYQSL
CCCEEEEECCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLLLLVNVNVMQYISPQKSVNNF
HHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA