| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is secA [H]
Identifier: 54294496
GI number: 54294496
Start: 1742564
End: 1745254
Strand: Reverse
Name: secA [H]
Synonym: lpl1565
Alternate gene names: 54294496
Gene position: 1745254-1742564 (Counterclockwise)
Preceding gene: 54294497
Following gene: 54294495
Centisome position: 52.16
GC content: 40.25
Gene sequence:
>2691_bases ATGCTGAGTACGTTAATTAAGAAAATGTTTGGAAGCCGAAATGAACGGACATTACGGCGAATGGAAAAGTCTGTAATGGC TATTAATGCGTTTGAGCCGAAAATGCAAGCTTTATCAAACGAAGAGCTGGCTGGAAAAACTCAAGAATTTAAAGAGCGTT TCAATAATGGTGAAAGTCTTGATGAGTTACTTGCGGAAGCTTTTGCTACGGTTAGAGAAGTATCATTGCGCACTCTCGGT CTTAGGCATTTTGACGTACAATTAATAGGCGGGATGGTATTGCATGAGGGAAATATTGCTGAAATGCGTACCGGGGAAGG TAAAACATTGGTTGCAACCTTGCCAGCCTATCTCAATGCCATTAGCGGACGTGGTGTACATATAGTCACTGTTAATGATT ATCTTGCGAAAAGAGATAGCCAATGGATGAAGCCCATATATGAATTTTTAGGGCTTACAGTTGGCGTTATCTATCCTGAT ATGTCGCACAAGGAAAAACAGGAAGCTTACAAAGCGGATATTGTTTATGGAACTAATAACGAATACGGTTTTGATTATTT ACGTGACAATATGGCTTTTAGTCTGACTGATAAGGTACAAAGAGAGCTTAATTTTGCTATTGTCGACGAAGTAGATTCCA TTTTGATCGATGAGGCGAGAACTCCATTGATTATATCTGGCGCGGCAGAAGATAGTTCAGAGCTGTATATCAAAATTAAT TCTTTGATCCCACAGTTAAAAAAACAAGAAGAAGAGGGTGACGAAGGCGATTATACTATAGATGAAAAGCAAAAACAGGC TCATCTGACTGATGCAGGCCATCTGCATATAGAAGAACTGCTGACCAAAGCCAAATTATTAGATCCTGGTGAGAGTCTTT ATCATGCCAGCAATATTATGTTGATGCATCATGTGAATGCGGCACTCAAGGCTCATGCAATGTTTCACAGAGATATTGAT TATATTGTCAAAGACAATCAAGTGGTGATAGTGGATGAGCATACCGGCCGTACCATGCCTGGAAGGCGTTGGTCAGAAGG CTTGCACCAGGCAGTCGAAGCCAAGGAGGGAGTCTCAATTCAAAATGAAAATCAGACTCTGGCTTCTATAACTTTTCAGA ATTTTTTCCGCATGTATAATAAATTATCAGGAATGACGGGTACTGCTGACACAGAAGCTTATGAGTTCCAACAAATATAT AATCTTGAAGTGGTTGTAATACCTACCAATAGGTCAATGATTAGAAAAGACGAGGCTGATTTGGTTTATCTAACACAGGC AGATAAATTCCAGGCGATAATCGAAGATGTACGAGAATGTGGTGTTCGTAGACAACCTGTCTTGGTTGGAACAGTTTCAA TCGAAGCTTCTGAGTTTTTAAGTCAACTCTTAAAAAAGGAGAACATAAAGCATCAGGTATTGAATGCAAAATTCCATGAA AAAGAAGCACAAATTATTGCTGAAGCCGGGCGCCCTGGTGCTGTAACCATTGCGACTAACATGGCTGGACGAGGAACAGA TATTGTTTTAGGTGGTAGCTTGGCAGCTGATCTGGCTAATTTGCCAGCTGATGCGAGTGAGCAAGAAAAAGAAGTAGTTA AAAAAGAATGGCAAAAACGTCATGATGAAGTGATTGCAGCAGGCGGACTGCGAATTATTGGCTCTGAGCGTCACGAATCA AGACGTATCGATAATCAATTAAGAGGGCGAGCCGGTCGCCAGGGTGATCCCGGCAGTAGCCGTTTTTATTTGTCACTTGA AGACAATTTAATGAGAATATTTGCTTCTGAGCGCGTGGGCTCTATGATGCGTCGTTTAGGCATGCAGCCAGGTGAGCCGA TTGAACATAGTTTGGTTACCAGAGCAATTGAAAATGCTCAACGCAAACTGGAAGGACATCATTTTGACGTAAGAAAGCAA TTGTTGGATTATGATAATGTAGCGAATGATCAGCGACAGGTCATTTATACTCAGCGTTCCTCTATTATGGCAATGACAGA TACACAGGAAGTTGTTGAAATGATGAGAGAAGAGGTAATGGATAGTCTGGTTGATACTTATATCCCCCCTCAAAGTCTGG AGGATCAGTGGGATCCACAGGCTTTGTCTGATGTTTTGTCAGATGAATTTAAAATCAAAGCCCCTGTGCCTGACTGGATT GATAAAGATCATAGTATACAACCTGAGCAAATTAAAGAAAAAATTCTTGCTTTAGCTATAGAGCATTATGATGAAAAAGT AAGAAAAGTTGGAAGGCCAGTCATTTCACAATTTGAAAAATCAATTATTTTACAAACTTTAGATAATCATTGGCGTGAAC ACTTGGCTGCAATGGATCAATTACGTCAGGGAATTCATTTAAGGGGTTATGCTCAGAAGGATCCAAAGCAGGAATACAAA AAAGAAGCTTTTAGTTTGTTTACAATGATGCTGGATAATCTTAAGTATGAGGTGATCAGGATACTATCATCCGTTGAAAT TCAAACGGAGGAGGATGCCCATGTCGTTGAAGAGCAACGTAGAGCGGAGCAGATTAAAAAAATGAATCTCATGCACGAAA ATTTATCAGAGAATGATGAAGCAAGTGAAACGCAAACTTTTAGACGACAAGAAAAGAAAATTGGCCGTAATGATCCTTGC CCCTGTGGCTCAGGTAAAAAATATAAAGCCTGTCATGGAAGCCTCGTGTGA
Upstream 100 bases:
>100_bases AAATAATAGAGCAGATGTCAACATTTCGTGGAATTTTATCTAGATTTCTAGTACATTAACGATGTTTATTAATTGGAACA TCCTGAGGGTTATTGAGGCC
Downstream 100 bases:
>100_bases AAGTAGCAGTTGCTATCATTATCGATGAAAAACAGCGTATACTAATTACCCAACGTCCTTTTCATGTCGCACATGGGGGA CTTTGGGAGTTTCCTGGCGG
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 896; Mature: 896
Protein sequence:
>896_residues MLSTLIKKMFGSRNERTLRRMEKSVMAINAFEPKMQALSNEELAGKTQEFKERFNNGESLDELLAEAFATVREVSLRTLG LRHFDVQLIGGMVLHEGNIAEMRTGEGKTLVATLPAYLNAISGRGVHIVTVNDYLAKRDSQWMKPIYEFLGLTVGVIYPD MSHKEKQEAYKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISGAAEDSSELYIKIN SLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIMLMHHVNAALKAHAMFHRDID YIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVSIQNENQTLASITFQNFFRMYNKLSGMTGTADTEAYEFQQIY NLEVVVIPTNRSMIRKDEADLVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHE KEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEVVKKEWQKRHDEVIAAGGLRIIGSERHES RRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASERVGSMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQ LLDYDNVANDQRQVIYTQRSSIMAMTDTQEVVEMMREEVMDSLVDTYIPPQSLEDQWDPQALSDVLSDEFKIKAPVPDWI DKDHSIQPEQIKEKILALAIEHYDEKVRKVGRPVISQFEKSIILQTLDNHWREHLAAMDQLRQGIHLRGYAQKDPKQEYK KEAFSLFTMMLDNLKYEVIRILSSVEIQTEEDAHVVEEQRRAEQIKKMNLMHENLSENDEASETQTFRRQEKKIGRNDPC PCGSGKKYKACHGSLV
Sequences:
>Translated_896_residues MLSTLIKKMFGSRNERTLRRMEKSVMAINAFEPKMQALSNEELAGKTQEFKERFNNGESLDELLAEAFATVREVSLRTLG LRHFDVQLIGGMVLHEGNIAEMRTGEGKTLVATLPAYLNAISGRGVHIVTVNDYLAKRDSQWMKPIYEFLGLTVGVIYPD MSHKEKQEAYKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISGAAEDSSELYIKIN SLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIMLMHHVNAALKAHAMFHRDID YIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVSIQNENQTLASITFQNFFRMYNKLSGMTGTADTEAYEFQQIY NLEVVVIPTNRSMIRKDEADLVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHE KEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEVVKKEWQKRHDEVIAAGGLRIIGSERHES RRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASERVGSMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQ LLDYDNVANDQRQVIYTQRSSIMAMTDTQEVVEMMREEVMDSLVDTYIPPQSLEDQWDPQALSDVLSDEFKIKAPVPDWI DKDHSIQPEQIKEKILALAIEHYDEKVRKVGRPVISQFEKSIILQTLDNHWREHLAAMDQLRQGIHLRGYAQKDPKQEYK KEAFSLFTMMLDNLKYEVIRILSSVEIQTEEDAHVVEEQRRAEQIKKMNLMHENLSENDEASETQTFRRQEKKIGRNDPC PCGSGKKYKACHGSLV >Mature_896_residues MLSTLIKKMFGSRNERTLRRMEKSVMAINAFEPKMQALSNEELAGKTQEFKERFNNGESLDELLAEAFATVREVSLRTLG LRHFDVQLIGGMVLHEGNIAEMRTGEGKTLVATLPAYLNAISGRGVHIVTVNDYLAKRDSQWMKPIYEFLGLTVGVIYPD MSHKEKQEAYKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISGAAEDSSELYIKIN SLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIMLMHHVNAALKAHAMFHRDID YIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVSIQNENQTLASITFQNFFRMYNKLSGMTGTADTEAYEFQQIY NLEVVVIPTNRSMIRKDEADLVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHE KEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEVVKKEWQKRHDEVIAAGGLRIIGSERHES RRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASERVGSMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQ LLDYDNVANDQRQVIYTQRSSIMAMTDTQEVVEMMREEVMDSLVDTYIPPQSLEDQWDPQALSDVLSDEFKIKAPVPDWI DKDHSIQPEQIKEKILALAIEHYDEKVRKVGRPVISQFEKSIILQTLDNHWREHLAAMDQLRQGIHLRGYAQKDPKQEYK KEAFSLFTMMLDNLKYEVIRILSSVEIQTEEDAHVVEEQRRAEQIKKMNLMHENLSENDEASETQTFRRQEKKIGRNDPC PCGSGKKYKACHGSLV
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=902, Percent_Identity=63.3037694013304, Blast_Score=1191, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 101995; Mature: 101995
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTLIKKMFGSRNERTLRRMEKSVMAINAFEPKMQALSNEELAGKTQEFKERFNNGESL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCHHHHHHHCCCCCCH DELLAEAFATVREVSLRTLGLRHFDVQLIGGMVLHEGNIAEMRTGEGKTLVATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCEEECCCCCEEEEEHHHHHHH ISGRGVHIVTVNDYLAKRDSQWMKPIYEFLGLTVGVIYPDMSHKEKQEAYKADIVYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHEEEEEECCC EYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISGAAEDSSELYIKIN CCCHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHH SLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIM HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCEE LMHHVNAALKAHAMFHRDIDYIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVSI EEHHHHHHHHHHHHHHHCCHHEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC QNENQTLASITFQNFFRMYNKLSGMTGTADTEAYEFQQIYNLEVVVIPTNRSMIRKDEAD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEEECCCHHHHCCCCC LVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHE EEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHHCCHHHH KEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEVVKKEWQKR HHHHHHHHCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHH HDEVIAAGGLRIIGSERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASERVG HHHEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHH SMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQLLDYDNVANDQRQVIYTQRS HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHEEEEECC SIMAMTDTQEVVEMMREEVMDSLVDTYIPPQSLEDQWDPQALSDVLSDEFKIKAPVPDWI CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHC DKDHSIQPEQIKEKILALAIEHYDEKVRKVGRPVISQFEKSIILQTLDNHWREHLAAMDQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQGIHLRGYAQKDPKQEYKKEAFSLFTMMLDNLKYEVIRILSSVEIQTEEDAHVVEEQR HHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RAEQIKKMNLMHENLSENDEASETQTFRRQEKKIGRNDPCPCGSGKKYKACHGSLV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSTLIKKMFGSRNERTLRRMEKSVMAINAFEPKMQALSNEELAGKTQEFKERFNNGESL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCHHHHHHHCCCCCCH DELLAEAFATVREVSLRTLGLRHFDVQLIGGMVLHEGNIAEMRTGEGKTLVATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCEEECCCCCEEEEEHHHHHHH ISGRGVHIVTVNDYLAKRDSQWMKPIYEFLGLTVGVIYPDMSHKEKQEAYKADIVYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHEEEEEECCC EYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISGAAEDSSELYIKIN CCCHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHH SLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIM HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCEE LMHHVNAALKAHAMFHRDIDYIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVSI EEHHHHHHHHHHHHHHHCCHHEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC QNENQTLASITFQNFFRMYNKLSGMTGTADTEAYEFQQIYNLEVVVIPTNRSMIRKDEAD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEEECCCHHHHCCCCC LVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHE EEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHHCCHHHH KEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEVVKKEWQKR HHHHHHHHCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHH HDEVIAAGGLRIIGSERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASERVG HHHEECCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHH SMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQLLDYDNVANDQRQVIYTQRS HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHEEEEECC SIMAMTDTQEVVEMMREEVMDSLVDTYIPPQSLEDQWDPQALSDVLSDEFKIKAPVPDWI CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHC DKDHSIQPEQIKEKILALAIEHYDEKVRKVGRPVISQFEKSIILQTLDNHWREHLAAMDQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQGIHLRGYAQKDPKQEYKKEAFSLFTMMLDNLKYEVIRILSSVEIQTEEDAHVVEEQR HHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RAEQIKKMNLMHENLSENDEASETQTFRRQEKKIGRNDPCPCGSGKKYKACHGSLV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA