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The map label for this gene is 54294491

Identifier: 54294491

GI number: 54294491

Start: 1739038

End: 1739511

Strand: Direct

Name: 54294491

Synonym: lpl1560

Alternate gene names: NA

Gene position: 1739038-1739511 (Clockwise)

Preceding gene: 54294490

Following gene: 54294492

Centisome position: 51.98

GC content: 39.24

Gene sequence:

>474_bases
ATGAGGAATTATATTTTTTATGGTTTACTACTATTAATTGGTTTATCCCATCAAGGCTTTACTGCCCCAATGATGAAAAA
AGGAAGTTATTGGAAATGCGTAACTTATGATAAAGCCAATAAAGCATGGACGGCGCAAAGTTCATACCGAAAGGTGGCTA
TCAATGTTGCATTTGCTGCTTGCAAAAAAGAAAGCCAACTTCCCGCAACATGTAAGACATCCATATCAAATTGTGAAGGA
TTTATAAATGGAGTAAGCACCAGACCAATGTGGCGCTGCACAGCCATCGATTTTACTGCCCAACCTTGGGAAAGTAATTT
TTACTCAAATCGGGATGATGCCGCCTTAGCTGCCCAGGCCTATTGTAAAGAAAACAGTACACTACCTGCTACTTGTTATA
TTAATATGGTAACTTGTGCAAACAAAAATGAAGGAGCCCACTCAGATGGTTTATTCAGTGGGACTAACTGGTAA

Upstream 100 bases:

>100_bases
ATTACCTGGCAAATAATGGTGTTCGTTTACAACAAGGCTGGTATTATTCCAAAGGGCTATCCATTGCTGAATTAACAGCC
TTGCTTAAAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
TATTGCCAGTGGCAAAAGTACAGTCGCAGAATTTTTTTCCGAGCTGGGTATAAATGTTATTTATGCAGATAAAATTGCCA
AAGAATTAACTTCTAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRNYIFYGLLLLIGLSHQGFTAPMMKKGSYWKCVTYDKANKAWTAQSSYRKVAINVAFAACKKESQLPATCKTSISNCEG
FINGVSTRPMWRCTAIDFTAQPWESNFYSNRDDAALAAQAYCKENSTLPATCYINMVTCANKNEGAHSDGLFSGTNW

Sequences:

>Translated_157_residues
MRNYIFYGLLLLIGLSHQGFTAPMMKKGSYWKCVTYDKANKAWTAQSSYRKVAINVAFAACKKESQLPATCKTSISNCEG
FINGVSTRPMWRCTAIDFTAQPWESNFYSNRDDAALAAQAYCKENSTLPATCYINMVTCANKNEGAHSDGLFSGTNW
>Mature_157_residues
MRNYIFYGLLLLIGLSHQGFTAPMMKKGSYWKCVTYDKANKAWTAQSSYRKVAINVAFAACKKESQLPATCKTSISNCEG
FINGVSTRPMWRCTAIDFTAQPWESNFYSNRDDAALAAQAYCKENSTLPATCYINMVTCANKNEGAHSDGLFSGTNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYIFYGLLLLIGLSHQGFTAPMMKKGSYWKCVTYDKANKAWTAQSSYRKVAINVAFAA
CCCHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCCCCEEECCCCCEEEEEEEEEEH
CKKESQLPATCKTSISNCEGFINGVSTRPMWRCTAIDFTAQPWESNFYSNRDDAALAAQA
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
YCKENSTLPATCYINMVTCANKNEGAHSDGLFSGTNW
HHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNYIFYGLLLLIGLSHQGFTAPMMKKGSYWKCVTYDKANKAWTAQSSYRKVAINVAFAA
CCCHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCCCCEEECCCCCEEEEEEEEEEH
CKKESQLPATCKTSISNCEGFINGVSTRPMWRCTAIDFTAQPWESNFYSNRDDAALAAQA
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
YCKENSTLPATCYINMVTCANKNEGAHSDGLFSGTNW
HHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA