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The map label for this gene is 54294483

Identifier: 54294483

GI number: 54294483

Start: 1730108

End: 1730422

Strand: Reverse

Name: 54294483

Synonym: lpl1552

Alternate gene names: NA

Gene position: 1730422-1730108 (Counterclockwise)

Preceding gene: 54294484

Following gene: 54294482

Centisome position: 51.72

GC content: 39.05

Gene sequence:

>315_bases
ATGCCAATTTATGAATATCAGTGCACAAACTGTCATCATCAATTTGATTTGATGCAAAAAGTTACGGATGCGCCTGTAAA
ACAATGCCCAAAGTGTTATGAAAATACTGTAACAAAACTTATTTCTCCGGCTGGATTTCAGTTAAAGGGGACTGGCTGGT
ATGTCACAGATTTTAAAAATAAAGGTAACGGACCAAAGGAGTCAACTGAGAATAAATCAGGAGATCCCGGCATCAATAAA
GAGAATTCTTCTAAAGAAACTCCCGCAGCAAGCTCTGCAGATAGCGCAAAATCGACAAAAGGTGATAGCGAGTGA

Upstream 100 bases:

>100_bases
TACCTGATGTTATTGCTTGTTCTGCTTGCGCTATACCCATGGCAGCAATTATAATGAAAAGTTAAATTACAGATACTTCG
AGTTTATGGAGTGATGCTAG

Downstream 100 bases:

>100_bases
AATTAATCTCCCTCAGAGCCTATTTAATTACCGGGTTAATAGTGTGGTTACCAATATTTGTAACCATTGTAGTCCTGCGA
TTTATTATTGATATGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Cytoplasmic Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; Regulatory Protein Fmdb Family; FmdB Transcriptional Regulator; FmdB Family Protein

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPIYEYQCTNCHHQFDLMQKVTDAPVKQCPKCYENTVTKLISPAGFQLKGTGWYVTDFKNKGNGPKESTENKSGDPGINK
ENSSKETPAASSADSAKSTKGDSE

Sequences:

>Translated_104_residues
MPIYEYQCTNCHHQFDLMQKVTDAPVKQCPKCYENTVTKLISPAGFQLKGTGWYVTDFKNKGNGPKESTENKSGDPGINK
ENSSKETPAASSADSAKSTKGDSE
>Mature_103_residues
PIYEYQCTNCHHQFDLMQKVTDAPVKQCPKCYENTVTKLISPAGFQLKGTGWYVTDFKNKGNGPKESTENKSGDPGINKE
NSSKETPAASSADSAKSTKGDSE

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11367; Mature: 11235

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYEYQCTNCHHQFDLMQKVTDAPVKQCPKCYENTVTKLISPAGFQLKGTGWYVTDFKN
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCC
KGNGPKESTENKSGDPGINKENSSKETPAASSADSAKSTKGDSE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIYEYQCTNCHHQFDLMQKVTDAPVKQCPKCYENTVTKLISPAGFQLKGTGWYVTDFKN
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCC
KGNGPKESTENKSGDPGINKENSSKETPAASSADSAKSTKGDSE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA