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The map label for this gene is lssZ

Identifier: 54294443

GI number: 54294443

Start: 1684331

End: 1684936

Strand: Reverse

Name: lssZ

Synonym: lpl1512

Alternate gene names: NA

Gene position: 1684936-1684331 (Counterclockwise)

Preceding gene: 54294444

Following gene: 54294442

Centisome position: 50.36

GC content: 33.17

Gene sequence:

>606_bases
ATGCATATCTTGGCTAAAGTTATTCACTGTATCTTTCCATTAATTGCCCTAACACTTTTAATTATTGGAATCAAACGAAA
CGCGATTTATTATATTATTTCTTCGTTATGGATAAGCCTTATTTCATTAGTCATTCATTATCAGACTTCCGGTGGAGAGA
TTTTAGGTACTTATTTTAATTATCTTAACGCAGCAATATATACCACCAATTTATTCGTTTTGTGCTTATCTTTGGTTTGT
GTTTTGTGGCATTTAAGTAATGATAATGTAGCGTTTAAAATTGTTAGCAGTTTGTTTCAATCATTTATAGTCATTGGGGC
TTTATTGGTTGTAATCAATCTTTGGATTAACGCTTATTTTATCGAAAACAGGTTGACAGGAACCCCTGTGATGCAGGTAG
CTCTTTTAGAGAAACCGGAATATTGTGATTACAGATATATATTTTATAAGGTGGCACTGGATGGTACTGTTCACTATCTT
TGCCCTAATCATTACGGTTTAATCCCATCGATTGGCCGATTGTCTATAAGTCCAGATTTTATAGCATCGCAGTTATCAAT
ACCAAGCAAAAAGCAAATGCTCTTATTGCAACAAAAAAGGAGTTAA

Upstream 100 bases:

>100_bases
ATGTTCTGATTTATTTATATTAGGCCTGGCTAGTAACCCATGTAAATTACTGATATAACTATGTATGTTCTTATAATTTA
TAAAATAAGGGATGGAATCA

Downstream 100 bases:

>100_bases
ATTAGCTATTTTCTATATTTTAACAAATTGTTCTGATATTTATTATTTGATAGTATGTGTGTAACTTACCAGTATAGTGC
GTCTATGAAACGATTTTTTT

Product: secretion system protein Z

Products: NA

Alternate protein names: Type I Secretion System LssZ

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MHILAKVIHCIFPLIALTLLIIGIKRNAIYYIISSLWISLISLVIHYQTSGGEILGTYFNYLNAAIYTTNLFVLCLSLVC
VLWHLSNDNVAFKIVSSLFQSFIVIGALLVVINLWINAYFIENRLTGTPVMQVALLEKPEYCDYRYIFYKVALDGTVHYL
CPNHYGLIPSIGRLSISPDFIASQLSIPSKKQMLLLQQKRS

Sequences:

>Translated_201_residues
MHILAKVIHCIFPLIALTLLIIGIKRNAIYYIISSLWISLISLVIHYQTSGGEILGTYFNYLNAAIYTTNLFVLCLSLVC
VLWHLSNDNVAFKIVSSLFQSFIVIGALLVVINLWINAYFIENRLTGTPVMQVALLEKPEYCDYRYIFYKVALDGTVHYL
CPNHYGLIPSIGRLSISPDFIASQLSIPSKKQMLLLQQKRS
>Mature_201_residues
MHILAKVIHCIFPLIALTLLIIGIKRNAIYYIISSLWISLISLVIHYQTSGGEILGTYFNYLNAAIYTTNLFVLCLSLVC
VLWHLSNDNVAFKIVSSLFQSFIVIGALLVVINLWINAYFIENRLTGTPVMQVALLEKPEYCDYRYIFYKVALDGTVHYL
CPNHYGLIPSIGRLSISPDFIASQLSIPSKKQMLLLQQKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22792; Mature: 22792

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILAKVIHCIFPLIALTLLIIGIKRNAIYYIISSLWISLISLVIHYQTSGGEILGTYFN
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YLNAAIYTTNLFVLCLSLVCVLWHLSNDNVAFKIVSSLFQSFIVIGALLVVINLWINAYF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENRLTGTPVMQVALLEKPEYCDYRYIFYKVALDGTVHYLCPNHYGLIPSIGRLSISPDF
EECCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHH
IASQLSIPSKKQMLLLQQKRS
HHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MHILAKVIHCIFPLIALTLLIIGIKRNAIYYIISSLWISLISLVIHYQTSGGEILGTYFN
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YLNAAIYTTNLFVLCLSLVCVLWHLSNDNVAFKIVSSLFQSFIVIGALLVVINLWINAYF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENRLTGTPVMQVALLEKPEYCDYRYIFYKVALDGTVHYLCPNHYGLIPSIGRLSISPDF
EECCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHH
IASQLSIPSKKQMLLLQQKRS
HHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA