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The map label for this gene is 54294393

Identifier: 54294393

GI number: 54294393

Start: 1628999

End: 1629724

Strand: Direct

Name: 54294393

Synonym: lpl1462

Alternate gene names: NA

Gene position: 1628999-1629724 (Clockwise)

Preceding gene: 54294386

Following gene: 54294394

Centisome position: 48.69

GC content: 35.67

Gene sequence:

>726_bases
ATGGAAAATTTAGAGCATGGACATTCGCAAAAAGAAATCAGAGATCGATTAGCACAGGCCCCATCTCAAAATTACTTGCG
AGATTGGATATATGGAGGAATTGATGGTGTTGTCACTACTTTTGCCATTGTTTCCGGTGTTGTAGGTGGACAATTATCTT
CTTTAGTTATTCTAATTTTAGGTTTCGCCAACTTGCTTGCTGATGGTTTTTCAATGGCAGCAAGTAATTATCTGGGTACC
AAATCTGAGGTCGATCAATTTCAGCGTTATAAAACAATTGAAGAAAAACATATTGATTTTATTCCAGAAGGTGAAAAAAA
CGAAATAAAACAAATTTTTCAAAATAAAGGTTTGCATGGCCAAACATTAGATCAAGTTGTTGAGGAAATTACAGCGAACA
GAGCATTATGGATAAAAACCATGTTACAGGAAGAATATGGGTTGCCTGCTACACTTCGATTCCCGCTAAAATCTGCGCTT
TATACTTTTAGTGCGTTTCTACTTTTTGGAATTATTCCATTAATTCCTTACGTGCTGGTCATGAACAATTCGTTCATCTG
GTCTTGTTTTTTCACTGCAATTACATTTTTTGTCATCGGTTCAATCAAAAGCCACTGGTCAACAAAATCCTGGTTATACT
CCGGTTTTGAGACACTAATAATTGGCACTGTAACAGCCTCTCTCTCTTATGGTATTGGACTATTTTTACATTATTTTCTG
ACTTAA

Upstream 100 bases:

>100_bases
ACTCAAATATACTAAATTTTATTATATGCTTTGTCAAACTAGCGATAATATTGGCAGAATTGATAATTAATAAATAACAC
ATATGGAGAAAGGATCTGCT

Downstream 100 bases:

>100_bases
AATAAAACATAGCTCTGCTATTAGCGGTACTTGTTAGATATAAATTTTGTAGTTAATTACATGAGGCAATATTGGAAATG
ATTCATTTATTAATCAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Transmembrane Protein; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Ferritin-Like Domain Fused ; CCC1-Related Iron/Manganese Transporter Component

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MENLEHGHSQKEIRDRLAQAPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAASNYLGT
KSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSAL
YTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHYFL
T

Sequences:

>Translated_241_residues
MENLEHGHSQKEIRDRLAQAPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAASNYLGT
KSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSAL
YTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHYFL
T
>Mature_241_residues
MENLEHGHSQKEIRDRLAQAPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAASNYLGT
KSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSAL
YTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHYFL
T

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27129; Mature: 27129

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure
MENLEHGHSQKEIRDRLAQAPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILIL
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFANLLADGFSMAASNYLGTKSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
QTLDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSALYTFSAFLLFGIIPLIPYVLV
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHYFL
HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA