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The map label for this gene is thiO [H]

Identifier: 54294391

GI number: 54294391

Start: 1626710

End: 1627780

Strand: Reverse

Name: thiO [H]

Synonym: lpl1460

Alternate gene names: 54294391

Gene position: 1627780-1626710 (Counterclockwise)

Preceding gene: 54294392

Following gene: 54294390

Centisome position: 48.65

GC content: 40.71

Gene sequence:

>1071_bases
ATGCGAGCAGGCATTGTAGGTGCAGGGATCATGGGGCGTCTGCTGGCTTTTGCATTACATAATGCGGGCTGGCAGGTATC
TCTTTTTGATCGCTCTAATGAAAACATGAATTGCAGTACTTCTGCTGCAGGTCTATTAACCCCGTTTTCTGAATTGGATA
AATCAACACTATTGATTTCCACCTTGGGTCAAGAATCTATTAAGGACTGTTGGCCACGTATTATTGAGGATTTGCCTGAA
GCTGTATATTTTCAACAATCGGGCAGTCTGGTGCTATGCCATCCAGGCGATCAGGCAGAATGGATTCACTTTAGTCGACG
TATTCTGAGTCAACTCAATCTGAGTAATTCTGTTTTTCAAAAATTATCCTATGAAAATCTCATTGCGCTTGAGCCTGAGC
TGACAAAGTTTGAAACTGCTTATTATTTTCCAAATGAAGCGCATATTGATTGCCAAACACTAATGTTGTCTTTAAAAAAT
TATCTTGACTCTGTTTGCATAACTCACATTACCAATACTCCTGTCTTATCGCTTAAACCTGGAGAGATCAATACAAAACA
ACAAAGATATCATTTTGATGTCGTTTTCGATTGTCGTGGTTTAGGTGCGCAAAATGTATTTTCTGATTTACGAGGTATTA
GAGGCGAACTCATTTGGCTTCATGCGCCAGGAGTTCAACTACATCGGCCTATTCGTCTTCTGCATCCAAGGTACAGTCTA
TATCTTGTACCCAGACCTGGAAATCTTTACCTCATAGGCGCTAGCGAAATTGAGGCAGAAGATTTTAGTCCGGTTTCAGT
ACGTACGACTTTGGAGTTATTGACCGCTGTGTATTATTTACATGGGAACTTTGATGAAGCACGCATCATAAAAACGGTGA
CCCATTGCCGTCCAACTTTAGCAAATCATTTGCCACGTATTAAATTTGCCGACGGGCTAGTAGCAATTAACGGTCTTTAT
CGTCATGGTTATTTAATAGCCCCAGCCTTGGCAGAAGAAATTTTACGAGGTGTGATATCCAATTTCCGGCATCTGAATTA
TCCAGAACTTTGGGAGAGTTATTGTGATTAA

Upstream 100 bases:

>100_bases
ATGAACATTTTGATATCTCGCAATGCTATACGAATCGTTTTTTGCCAGATACACCTTATTCTGATTTGAAACCAATCGCC
TGTTGTCTTGAAAATTAATT

Downstream 100 bases:

>100_bases
TGTCTATTTAAACGATAAAATTTATAACATTGAATCTTCATTATCATTAAGTGCATTTTTAAAACAGCTTAATTATACTC
AACAGCATTTTGCTGTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRAGIVGAGIMGRLLAFALHNAGWQVSLFDRSNENMNCSTSAAGLLTPFSELDKSTLLISTLGQESIKDCWPRIIEDLPE
AVYFQQSGSLVLCHPGDQAEWIHFSRRILSQLNLSNSVFQKLSYENLIALEPELTKFETAYYFPNEAHIDCQTLMLSLKN
YLDSVCITHITNTPVLSLKPGEINTKQQRYHFDVVFDCRGLGAQNVFSDLRGIRGELIWLHAPGVQLHRPIRLLHPRYSL
YLVPRPGNLYLIGASEIEAEDFSPVSVRTTLELLTAVYYLHGNFDEARIIKTVTHCRPTLANHLPRIKFADGLVAINGLY
RHGYLIAPALAEEILRGVISNFRHLNYPELWESYCD

Sequences:

>Translated_356_residues
MRAGIVGAGIMGRLLAFALHNAGWQVSLFDRSNENMNCSTSAAGLLTPFSELDKSTLLISTLGQESIKDCWPRIIEDLPE
AVYFQQSGSLVLCHPGDQAEWIHFSRRILSQLNLSNSVFQKLSYENLIALEPELTKFETAYYFPNEAHIDCQTLMLSLKN
YLDSVCITHITNTPVLSLKPGEINTKQQRYHFDVVFDCRGLGAQNVFSDLRGIRGELIWLHAPGVQLHRPIRLLHPRYSL
YLVPRPGNLYLIGASEIEAEDFSPVSVRTTLELLTAVYYLHGNFDEARIIKTVTHCRPTLANHLPRIKFADGLVAINGLY
RHGYLIAPALAEEILRGVISNFRHLNYPELWESYCD
>Mature_356_residues
MRAGIVGAGIMGRLLAFALHNAGWQVSLFDRSNENMNCSTSAAGLLTPFSELDKSTLLISTLGQESIKDCWPRIIEDLPE
AVYFQQSGSLVLCHPGDQAEWIHFSRRILSQLNLSNSVFQKLSYENLIALEPELTKFETAYYFPNEAHIDCQTLMLSLKN
YLDSVCITHITNTPVLSLKPGEINTKQQRYHFDVVFDCRGLGAQNVFSDLRGIRGELIWLHAPGVQLHRPIRLLHPRYSL
YLVPRPGNLYLIGASEIEAEDFSPVSVRTTLELLTAVYYLHGNFDEARIIKTVTHCRPTLANHLPRIKFADGLVAINGLY
RHGYLIAPALAEEILRGVISNFRHLNYPELWESYCD

Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40228; Mature: 40228

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGIVGAGIMGRLLAFALHNAGWQVSLFDRSNENMNCSTSAAGLLTPFSELDKSTLLIS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHCCCHHHCCCCEEEEH
TLGQESIKDCWPRIIEDLPEAVYFQQSGSLVLCHPGDQAEWIHFSRRILSQLNLSNSVFQ
HHCHHHHHHHHHHHHHHCHHHEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHH
KLSYENLIALEPELTKFETAYYFPNEAHIDCQTLMLSLKNYLDSVCITHITNTPVLSLKP
HHCCCCEEEECCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GEINTKQQRYHFDVVFDCRGLGAQNVFSDLRGIRGELIWLHAPGVQLHRPIRLLHPRYSL
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCEEE
YLVPRPGNLYLIGASEIEAEDFSPVSVRTTLELLTAVYYLHGNFDEARIIKTVTHCRPTL
EEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ANHLPRIKFADGLVAINGLYRHGYLIAPALAEEILRGVISNFRHLNYPELWESYCD
HHCCCCEEECCCEEEEEHHHHCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MRAGIVGAGIMGRLLAFALHNAGWQVSLFDRSNENMNCSTSAAGLLTPFSELDKSTLLIS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHCCCHHHCCCCEEEEH
TLGQESIKDCWPRIIEDLPEAVYFQQSGSLVLCHPGDQAEWIHFSRRILSQLNLSNSVFQ
HHCHHHHHHHHHHHHHHCHHHEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHH
KLSYENLIALEPELTKFETAYYFPNEAHIDCQTLMLSLKNYLDSVCITHITNTPVLSLKP
HHCCCCEEEECCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GEINTKQQRYHFDVVFDCRGLGAQNVFSDLRGIRGELIWLHAPGVQLHRPIRLLHPRYSL
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCEEE
YLVPRPGNLYLIGASEIEAEDFSPVSVRTTLELLTAVYYLHGNFDEARIIKTVTHCRPTL
EEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ANHLPRIKFADGLVAINGLYRHGYLIAPALAEEILRGVISNFRHLNYPELWESYCD
HHCCCCEEECCCEEEEEHHHHCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371431 [H]