| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is yjjL [C]
Identifier: 54294348
GI number: 54294348
Start: 1581011
End: 1582300
Strand: Reverse
Name: yjjL [C]
Synonym: lpl1416
Alternate gene names: 54294348
Gene position: 1582300-1581011 (Counterclockwise)
Preceding gene: 54294349
Following gene: 54294338
Centisome position: 47.29
GC content: 34.96
Gene sequence:
>1290_bases ATGAGTTTAGAAAATAAAATCAGTTTAAAAGGTTTATTAGTTTGGTTAATCTGTGCGCTTTTTTTTATGTATGAGTTTTT ATTACGTACAGTAGTAGGCACCTTCCAAACACAACTGGTAAATGACCTAAATTTAACACCAATGACCTTTTCGTTATTAA GTTCAACCGGATATTTAGTCATTTATGGAATAATGCAAATTCCCGTTGGAATTATTGCTGCTCGATTTGGTTTAAAAAAA GCATTATTTATTGCTTTAGTTTTTTGTGCAAGCTCCACAATGGGTTTTGCGCTGTCGCATCATTTCGGCATAGCAATGTT TTGCCGCATCGTTATGGGCTTAGGCTCTTCTTTTGGATTTATTTGTTTATTAATCTCTGTCTATGATTGGATGCCTAGAA AAAATATTGCTTTGTTTATAGGTATTTCTCAATTCATCGGCACCCTGGGGCCAATGTTGGCTGCAGGCCCATTAAACTCA TTATCTCAAAACTCTATGATCGGATGGCGCGGTATATTTTTAAGTATGGCAATCATCGGTATGATTATCGCTGCACTGAC ATTGTTGTTTGTAGAAAACAACCGCAATAATAGAGAAAAATTTATTGTGCTTACCAAACCCGTTAAAATATCATTGAGTT TACAAAAACTAATGAGCCATAAGCAAGTCTGGAGTATCGCCCTCTTTTCAGGTTGTGTTTACTTTTCCATTGAGTATTTT TCAGAGAATATGGGTGTGGAATTTCTGATAAAAAAAGGATTTTCACCCATGTATTCTTCCTATATGATAACATTGGCATG GCTAGGTTATGCACTGGGTTGTCCCTTGTTTGGTTTTATATCAGATAAAATACATCGTAGAAAACCTGTGATGCTTACCA GTGCATTTGCTGCTTGGCTATCTCTATCAGGAATCATCTATTTTTCGTTTGGAGAAGTGCTAACTGGTTTTTGCTTTTTT ACTCTTGGCTTAAGTGCCAGTGGACAAAGCATCGGATTTGCTGCTATTGCAGAGCAATGCAAAGAAAACTATTTGGCAAT AGGATTAGCGTTTAATAATACAATGATCGCGATAATCACTTCAGTTAGTGCCCCAATCATTGGAGGAATGTTGTCCTATC CTGCTCAAATAAAAAATTATCAAGAAGCTCTATTTGTTCTGATTATATTTTCTATAATTTCAGTTATTATTTCAGCTTTT ATGATAAAGGAAACATTTGGAAAATCGGTGCGGGAAAATACAATACTTTCGTTTGATTCAACTAATAGATCCGGTAATTT ATATTGTTAA
Upstream 100 bases:
>100_bases CGCTAATTTATGAAGGTCAAACTATTTTTAAGGTCGCTACTTTTATTGATAACAACCGAGCTGAAATTGCCTTGGAAGCT TGGGGCAAATAGGTACAAGA
Downstream 100 bases:
>100_bases AAACTATACAAGTCATGTAACTCACTCGGGAGAAATTGAGCAGATAGGATGGTTTTCCCTTGATGCATTACCGGAAATGG TGAGCCCGGGAACCAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Sugar Phosphate Permease; Sugar Transporter; Transporter MFS Superfamily; Permease; Facilitator Family Transporter Transporter; Facilitator Superfamily Sugar Transporter; Transporter Facilitator Family; Facilitator Family Oxalate/Formate Antiporter; Sugar Transport Family Protein; Multidrug ABC Transporter; NasA Protein; MFS Transporter; Facilitator Protein; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Transmembrane Transporter; Facilitator Superfamily Protein Permease; Transport Proteins; Facilitator Family Protein; Facilitator Superfamily Transporter Transporter
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSLENKISLKGLLVWLICALFFMYEFLLRTVVGTFQTQLVNDLNLTPMTFSLLSSTGYLVIYGIMQIPVGIIAARFGLKK ALFIALVFCASSTMGFALSHHFGIAMFCRIVMGLGSSFGFICLLISVYDWMPRKNIALFIGISQFIGTLGPMLAAGPLNS LSQNSMIGWRGIFLSMAIIGMIIAALTLLFVENNRNNREKFIVLTKPVKISLSLQKLMSHKQVWSIALFSGCVYFSIEYF SENMGVEFLIKKGFSPMYSSYMITLAWLGYALGCPLFGFISDKIHRRKPVMLTSAFAAWLSLSGIIYFSFGEVLTGFCFF TLGLSASGQSIGFAAIAEQCKENYLAIGLAFNNTMIAIITSVSAPIIGGMLSYPAQIKNYQEALFVLIIFSIISVIISAF MIKETFGKSVRENTILSFDSTNRSGNLYC
Sequences:
>Translated_429_residues MSLENKISLKGLLVWLICALFFMYEFLLRTVVGTFQTQLVNDLNLTPMTFSLLSSTGYLVIYGIMQIPVGIIAARFGLKK ALFIALVFCASSTMGFALSHHFGIAMFCRIVMGLGSSFGFICLLISVYDWMPRKNIALFIGISQFIGTLGPMLAAGPLNS LSQNSMIGWRGIFLSMAIIGMIIAALTLLFVENNRNNREKFIVLTKPVKISLSLQKLMSHKQVWSIALFSGCVYFSIEYF SENMGVEFLIKKGFSPMYSSYMITLAWLGYALGCPLFGFISDKIHRRKPVMLTSAFAAWLSLSGIIYFSFGEVLTGFCFF TLGLSASGQSIGFAAIAEQCKENYLAIGLAFNNTMIAIITSVSAPIIGGMLSYPAQIKNYQEALFVLIIFSIISVIISAF MIKETFGKSVRENTILSFDSTNRSGNLYC >Mature_428_residues SLENKISLKGLLVWLICALFFMYEFLLRTVVGTFQTQLVNDLNLTPMTFSLLSSTGYLVIYGIMQIPVGIIAARFGLKKA LFIALVFCASSTMGFALSHHFGIAMFCRIVMGLGSSFGFICLLISVYDWMPRKNIALFIGISQFIGTLGPMLAAGPLNSL SQNSMIGWRGIFLSMAIIGMIIAALTLLFVENNRNNREKFIVLTKPVKISLSLQKLMSHKQVWSIALFSGCVYFSIEYFS ENMGVEFLIKKGFSPMYSSYMITLAWLGYALGCPLFGFISDKIHRRKPVMLTSAFAAWLSLSGIIYFSFGEVLTGFCFFT LGLSASGQSIGFAAIAEQCKENYLAIGLAFNNTMIAIITSVSAPIIGGMLSYPAQIKNYQEALFVLIIFSIISVIISAFM IKETFGKSVRENTILSFDSTNRSGNLYC
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47386; Mature: 47255
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLENKISLKGLLVWLICALFFMYEFLLRTVVGTFQTQLVNDLNLTPMTFSLLSSTGYLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEE IYGIMQIPVGIIAARFGLKKALFIALVFCASSTMGFALSHHFGIAMFCRIVMGLGSSFGF EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH ICLLISVYDWMPRKNIALFIGISQFIGTLGPMLAAGPLNSLSQNSMIGWRGIFLSMAIIG HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH MIIAALTLLFVENNRNNREKFIVLTKPVKISLSLQKLMSHKQVWSIALFSGCVYFSIEYF HHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEH SENMGVEFLIKKGFSPMYSSYMITLAWLGYALGCPLFGFISDKIHRRKPVMLTSAFAAWL HCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH SLSGIIYFSFGEVLTGFCFFTLGLSASGQSIGFAAIAEQCKENYLAIGLAFNNTMIAIIT HHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCEEEEEEE SVSAPIIGGMLSYPAQIKNYQEALFVLIIFSIISVIISAFMIKETFGKSVRENTILSFDS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEC TNRSGNLYC CCCCCCCCC >Mature Secondary Structure SLENKISLKGLLVWLICALFFMYEFLLRTVVGTFQTQLVNDLNLTPMTFSLLSSTGYLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEE IYGIMQIPVGIIAARFGLKKALFIALVFCASSTMGFALSHHFGIAMFCRIVMGLGSSFGF EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH ICLLISVYDWMPRKNIALFIGISQFIGTLGPMLAAGPLNSLSQNSMIGWRGIFLSMAIIG HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH MIIAALTLLFVENNRNNREKFIVLTKPVKISLSLQKLMSHKQVWSIALFSGCVYFSIEYF HHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEH SENMGVEFLIKKGFSPMYSSYMITLAWLGYALGCPLFGFISDKIHRRKPVMLTSAFAAWL HCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH SLSGIIYFSFGEVLTGFCFFTLGLSASGQSIGFAAIAEQCKENYLAIGLAFNNTMIAIIT HHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCEEEEEEE SVSAPIIGGMLSYPAQIKNYQEALFVLIIFSIISVIISAFMIKETFGKSVRENTILSFDS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEC TNRSGNLYC CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA