Click here to switch to the map view.

The map label for this gene is 54294325

Identifier: 54294325

GI number: 54294325

Start: 1552697

End: 1553545

Strand: Reverse

Name: 54294325

Synonym: lpl1390

Alternate gene names: NA

Gene position: 1553545-1552697 (Counterclockwise)

Preceding gene: 54294326

Following gene: 54294324

Centisome position: 46.43

GC content: 36.63

Gene sequence:

>849_bases
ATGATAAAAGATTATCTTATAGAAACCATGAATCAGGATGAGGTGAATCTTGCTATAACGTGGGCTGCCCGGGAAGGCTG
GAATCCAGGAATTCATGATGCAACATGTTTTTATCAAACTGATCCTCATGGTTTTTTTGCAGGTAAGCTGAATGGAAAAA
CGATAGCCATTGGTTCTGCTGTTATCTATGATGAATTTTTTGCTTTTTGTGGTTTCTATATGGTTGATAAACCCTATAGG
GAGCAAGGTTTTGGTTTGGAATTAACTAAAGCCAGATTAGCATATATTGGTAACAGAAATGCAGGAATTGATGGTGTGAT
CAACATGCTGGATAAATATGCCCGCATTGGTTATCAATTAGCACATAATAACGCCAGATATTGTCTTAATAAGACAATAA
AACCAATGTCATCTGAACCTCATATTGTACCATTAAATCAAATCGATTTTTCGCAGTTATCATCCTATGACCGCTTACAT
TTTCCAGCACCTCGTCCTCAATTTTTAAAATGCTGGATAAGTCAGCCACAAAGCTTGGCTCTTGCTTATTTAATTGATGG
CCAAATTAAAGGTTATGGGGTTATCAGAACCTGTCATAAAGGATTTAAGATTGGACCACTATTTGCGGATACACCGGAAA
TTGCACACCAACTTTTCACTAATTTGGTCCCATATGCTAAGGGTCAATTGATATTTCTGGATATTCCAGAGAATAACCCT
TTAGCAATTGAGCTGGTCAGTCAACATCAAATGGAGAAGGTATTCGCTACAGCACGTATGTATTTAAAAGGAGAACCCCT
GGTTAAAAAAGAAAGTATTTATGGAATTACTACTTTTGAATTAGGATAA

Upstream 100 bases:

>100_bases
AGCCACCAATAAGATAAGGGAACTGATATCACGAAGTCTGACTAAGTAAGAAAAAACGCTTACTTATAGCTATAATTATT
TTTAAAGAACAGGGATCGTT

Downstream 100 bases:

>100_bases
ACCATGACCCGAGATCTTACTGGATATGGATCAGAACAAATTAATTTGACCTGGCCCAATAAGGCTAAAATTGCTATTAA
TTTTGTTATTAATTACGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Protein; Ribosomal-Protein-Alanine Acetyltransferase; Ribosomal-Protein-Alanine N-Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Acetyltransferase Gnat Family Protein; N-Acetyltransferase

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIKDYLIETMNQDEVNLAITWAAREGWNPGIHDATCFYQTDPHGFFAGKLNGKTIAIGSAVIYDEFFAFCGFYMVDKPYR
EQGFGLELTKARLAYIGNRNAGIDGVINMLDKYARIGYQLAHNNARYCLNKTIKPMSSEPHIVPLNQIDFSQLSSYDRLH
FPAPRPQFLKCWISQPQSLALAYLIDGQIKGYGVIRTCHKGFKIGPLFADTPEIAHQLFTNLVPYAKGQLIFLDIPENNP
LAIELVSQHQMEKVFATARMYLKGEPLVKKESIYGITTFELG

Sequences:

>Translated_282_residues
MIKDYLIETMNQDEVNLAITWAAREGWNPGIHDATCFYQTDPHGFFAGKLNGKTIAIGSAVIYDEFFAFCGFYMVDKPYR
EQGFGLELTKARLAYIGNRNAGIDGVINMLDKYARIGYQLAHNNARYCLNKTIKPMSSEPHIVPLNQIDFSQLSSYDRLH
FPAPRPQFLKCWISQPQSLALAYLIDGQIKGYGVIRTCHKGFKIGPLFADTPEIAHQLFTNLVPYAKGQLIFLDIPENNP
LAIELVSQHQMEKVFATARMYLKGEPLVKKESIYGITTFELG
>Mature_282_residues
MIKDYLIETMNQDEVNLAITWAAREGWNPGIHDATCFYQTDPHGFFAGKLNGKTIAIGSAVIYDEFFAFCGFYMVDKPYR
EQGFGLELTKARLAYIGNRNAGIDGVINMLDKYARIGYQLAHNNARYCLNKTIKPMSSEPHIVPLNQIDFSQLSSYDRLH
FPAPRPQFLKCWISQPQSLALAYLIDGQIKGYGVIRTCHKGFKIGPLFADTPEIAHQLFTNLVPYAKGQLIFLDIPENNP
LAIELVSQHQMEKVFATARMYLKGEPLVKKESIYGITTFELG

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25148971, Length=213, Percent_Identity=27.6995305164319, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31885; Mature: 31885

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDYLIETMNQDEVNLAITWAAREGWNPGIHDATCFYQTDPHGFFAGKLNGKTIAIGSA
CCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEECHH
VIYDEFFAFCGFYMVDKPYREQGFGLELTKARLAYIGNRNAGIDGVINMLDKYARIGYQL
HHHHHHHHHHHHHHCCCCHHHCCCCEEEHHHHEEEECCCCCCHHHHHHHHHHHHHHCEEE
AHNNARYCLNKTIKPMSSEPHIVPLNQIDFSQLSSYDRLHFPAPRPQFLKCWISQPQSLA
ECCCCCEEHHCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEE
LAYLIDGQIKGYGVIRTCHKGFKIGPLFADTPEIAHQLFTNLVPYAKGQLIFLDIPENNP
EEEEECCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
LAIELVSQHQMEKVFATARMYLKGEPLVKKESIYGITTFELG
EEEEEHHHHHHHHHHHHHHHEECCCCCEEECCEEEEEEEECC
>Mature Secondary Structure
MIKDYLIETMNQDEVNLAITWAAREGWNPGIHDATCFYQTDPHGFFAGKLNGKTIAIGSA
CCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEECHH
VIYDEFFAFCGFYMVDKPYREQGFGLELTKARLAYIGNRNAGIDGVINMLDKYARIGYQL
HHHHHHHHHHHHHHCCCCHHHCCCCEEEHHHHEEEECCCCCCHHHHHHHHHHHHHHCEEE
AHNNARYCLNKTIKPMSSEPHIVPLNQIDFSQLSSYDRLHFPAPRPQFLKCWISQPQSLA
ECCCCCEEHHCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEE
LAYLIDGQIKGYGVIRTCHKGFKIGPLFADTPEIAHQLFTNLVPYAKGQLIFLDIPENNP
EEEEECCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
LAIELVSQHQMEKVFATARMYLKGEPLVKKESIYGITTFELG
EEEEEHHHHHHHHHHHHHHHEECCCCCEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA