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The map label for this gene is 54294324

Identifier: 54294324

GI number: 54294324

Start: 1551803

End: 1552693

Strand: Reverse

Name: 54294324

Synonym: lpl1389

Alternate gene names: NA

Gene position: 1552693-1551803 (Counterclockwise)

Preceding gene: 54294325

Following gene: 54294323

Centisome position: 46.41

GC content: 38.16

Gene sequence:

>891_bases
ATGACCCGAGATCTTACTGGATATGGATCAGAACAAATTAATTTGACCTGGCCCAATAAGGCTAAAATTGCTATTAATTT
TGTTATTAATTACGAAGAAGGGGCAGAGTTAACTCCACTTAACGGTGATACAAAGGCTGAATTTTACGGAAGTGATTTTC
CTTTCGTTCCTAAAGGAAATGCAGAAAGGAATTATAGTATCGAATCTATTTATGAATACGGAAGTCGAGTTGGGATTTGG
CGTTTAATCCGTCTTTTTGACAAGCATTCCATCCCCATAACTTTTTTCATAACAGGTTATGCCTTAATATTAAATCCTGA
ATTCTCAGGCTATCTTGCAAGTCATAACCATGAAGTTGCTGGGCATGGATGGCGATGGATTGATTATTCAAAAGAAAGTA
AGGCAACGGAAAAAAAACACATCTCTCGCTGTATTGATACCTTGCAGGAACTCACTGGACAAAGGCCATTGGGCTGGTAC
ACTGGAAGAAGAAGCCCATTTACCCGCGATCTGCTAACTCAAATTGGTGGGTTTGTCTATGATTCAGATAGTTACGCCGA
TGAACTCCCCTATTTCATTAACAAGCATCTTGTAATCCCATACTCATTAGACTGTAATGATTTTCGTTTCACAATTTCTC
CCGGCTTTGTCACCGCACAGGATTTCTATCAACGTCTTAAAAATACTTTTGATTACCTTTATCAAGAAAATCGATTATCT
ATCATGACTATTGGTTTACATCCGCGATTAAGCGGCAAACCCGATCGTTGCCATGCCCTTAATGAATTTCTAAGCTATAT
CCGACAATTTCAAAATATATGGATAGCAAAGAGAATAGATATTGCACTGTACTGGTTAACCAAACACACCCAGATTAAGC
AGGATTTATGA

Upstream 100 bases:

>100_bases
GGAGAAGGTATTCGCTACAGCACGTATGTATTTAAAAGGAGAACCCCTGGTTAAAAAAGAAAGTATTTATGGAATTACTA
CTTTTGAATTAGGATAAACC

Downstream 100 bases:

>100_bases
AATACCCAATCTCATTATTAGGAAATGTTTTTAATTCAGTCGTTTAGTTCATCCAAGATTCTTCGTTAAAACATTTTTTG
CCTTGAACGTGAGGTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Saccharide Deacetylase Slightly; Hydrolase; Deacetylase

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTRDLTGYGSEQINLTWPNKAKIAINFVINYEEGAELTPLNGDTKAEFYGSDFPFVPKGNAERNYSIESIYEYGSRVGIW
RLIRLFDKHSIPITFFITGYALILNPEFSGYLASHNHEVAGHGWRWIDYSKESKATEKKHISRCIDTLQELTGQRPLGWY
TGRRSPFTRDLLTQIGGFVYDSDSYADELPYFINKHLVIPYSLDCNDFRFTISPGFVTAQDFYQRLKNTFDYLYQENRLS
IMTIGLHPRLSGKPDRCHALNEFLSYIRQFQNIWIAKRIDIALYWLTKHTQIKQDL

Sequences:

>Translated_296_residues
MTRDLTGYGSEQINLTWPNKAKIAINFVINYEEGAELTPLNGDTKAEFYGSDFPFVPKGNAERNYSIESIYEYGSRVGIW
RLIRLFDKHSIPITFFITGYALILNPEFSGYLASHNHEVAGHGWRWIDYSKESKATEKKHISRCIDTLQELTGQRPLGWY
TGRRSPFTRDLLTQIGGFVYDSDSYADELPYFINKHLVIPYSLDCNDFRFTISPGFVTAQDFYQRLKNTFDYLYQENRLS
IMTIGLHPRLSGKPDRCHALNEFLSYIRQFQNIWIAKRIDIALYWLTKHTQIKQDL
>Mature_295_residues
TRDLTGYGSEQINLTWPNKAKIAINFVINYEEGAELTPLNGDTKAEFYGSDFPFVPKGNAERNYSIESIYEYGSRVGIWR
LIRLFDKHSIPITFFITGYALILNPEFSGYLASHNHEVAGHGWRWIDYSKESKATEKKHISRCIDTLQELTGQRPLGWYT
GRRSPFTRDLLTQIGGFVYDSDSYADELPYFINKHLVIPYSLDCNDFRFTISPGFVTAQDFYQRLKNTFDYLYQENRLSI
MTIGLHPRLSGKPDRCHALNEFLSYIRQFQNIWIAKRIDIALYWLTKHTQIKQDL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34533; Mature: 34402

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDLTGYGSEQINLTWPNKAKIAINFVINYEEGAELTPLNGDTKAEFYGSDFPFVPKGN
CCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEECCCCCCCCEEEECCCCCCCCCCC
AERNYSIESIYEYGSRVGIWRLIRLFDKHSIPITFFITGYALILNPEFSGYLASHNHEVA
CCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCEEECCCCEEC
GHGWRWIDYSKESKATEKKHISRCIDTLQELTGQRPLGWYTGRRSPFTRDLLTQIGGFVY
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCEEE
DSDSYADELPYFINKHLVIPYSLDCNDFRFTISPGFVTAQDFYQRLKNTFDYLYQENRLS
CCCCCHHHCCHHHCCCEEEEEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCEE
IMTIGLHPRLSGKPDRCHALNEFLSYIRQFQNIWIAKRIDIALYWLTKHTQIKQDL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCHHHHCC
>Mature Secondary Structure 
TRDLTGYGSEQINLTWPNKAKIAINFVINYEEGAELTPLNGDTKAEFYGSDFPFVPKGN
CCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEECCCCCCCCEEEECCCCCCCCCCC
AERNYSIESIYEYGSRVGIWRLIRLFDKHSIPITFFITGYALILNPEFSGYLASHNHEVA
CCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCEEECCCCEEC
GHGWRWIDYSKESKATEKKHISRCIDTLQELTGQRPLGWYTGRRSPFTRDLLTQIGGFVY
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCEEE
DSDSYADELPYFINKHLVIPYSLDCNDFRFTISPGFVTAQDFYQRLKNTFDYLYQENRLS
CCCCCHHHCCHHHCCCEEEEEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCEE
IMTIGLHPRLSGKPDRCHALNEFLSYIRQFQNIWIAKRIDIALYWLTKHTQIKQDL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA