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The map label for this gene is yciM [H]

Identifier: 54294309

GI number: 54294309

Start: 1533196

End: 1534365

Strand: Direct

Name: yciM [H]

Synonym: lpl1374

Alternate gene names: 54294309

Gene position: 1533196-1534365 (Clockwise)

Preceding gene: 54294308

Following gene: 54294310

Centisome position: 45.83

GC content: 38.97

Gene sequence:

>1170_bases
ATGATTAATTTATGGCCACTGTTGTTACCTGCTGCCGCATGGTCTGGCTGGTGGCTGGCTAACCGCAGTAATTCCAATAA
AGATGCTCATGTCCACAATCGTTTATCGCGAGAATATGTAGTTGGACTTAATTATTTATTAAATGAACAATCTGATAAAG
CGGTTGACGTATTTATCAAGCTTCTAGAAGTTGATAGCGATACAGTAGAAACCCATCTTGCACTGGGTAGCTTGTTCAGG
CGTAGAGGGGAAGTAGACAGGGCTATTCGTATTCATCAAAATTTAATCGCCAGGCCTCAATTAAGTATTCAACAACGAAA
GGAAGCCCTAATGGCTTTAGGGCAAGATTATATGAGTGCTGGAGTGTTTGACCGAGCTGAACGTATATTCCTTGAAGTCG
TTGAGTTGGGCGGGAGTAGAGAAACAAGCAGTCTTCAAGGATTATTAGCAATTTACCAACAAGAAAAAGCTTGGGAAAAA
GCTTTAGACATTATTAAAAAACTGGAAATTTCTACCGGAGCCAGTTTCCACAATCAAGCAGCTCATTATTACTGTGAAAT
GGCTAGTCAGGCGCTTAAAATCAATGCAATGGATAGAGCAATTTATTGTATAAAGCAAGCAATGAATGTTGATCCGGAAT
CCGTAAGAGCCAGTTTAATGAATGCTACAATTGAAATAAAAGAAGGCCGCTATAAACAGGCTATTCGATCTTTAAAAAGA
GTGCCACAGCAGGATGCAGAATTTTTAACCGAAATCATTGAACCATTAGTTCTTTGTCATAAAGAGCTGGACTCCATGCA
GGATTGTATTCACTATCTTGAGCAAACTTTGGAAAAACATCCGAGAGCCTCTGTAATTTTCGTTATAGCTGATTATTTGC
GACAAAATAAGGGTATGGATATTGCAATTGACTTTGTGGCTGACAATTTAAGTAAACATCCATCGATAAGAGGTTTGAAT
CGTTTGATTTATTGGCACTTGGAGTCTGCTCACGGGAAAGTACGTGAAAAACTGCAAATGCTTTATGATATTACTAGCAA
GTTTTTAGATAATAAGCCCATATATCGATGTGGGCATTGTGGTTTTGGTGGTAAACATTTACATTGGCATTGCCCAAGTT
GTAAACAGTGGGGTAGAATGAAGCCTATCCATGGTTTGGAAGGGGATTAA

Upstream 100 bases:

>100_bases
ACTGAAAAAGAAATTAAGAATTTACGTTCAATACCCTTACAAGATCAACATTAATTTTATTATTAGTGGAAACTCGATAT
GCAGAGAGGAAAATTAATAG

Downstream 100 bases:

>100_bases
CCTGAGACATACTCTCAGAAAGTTAATGAACAGTTGCATATTAGCTTAGTATCGTAATTCAAATTTGTTATTGCAAATTA
AGTAAAACAATTCGAACAGG

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MINLWPLLLPAAAWSGWWLANRSNSNKDAHVHNRLSREYVVGLNYLLNEQSDKAVDVFIKLLEVDSDTVETHLALGSLFR
RRGEVDRAIRIHQNLIARPQLSIQQRKEALMALGQDYMSAGVFDRAERIFLEVVELGGSRETSSLQGLLAIYQQEKAWEK
ALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRASLMNATIEIKEGRYKQAIRSLKR
VPQQDAEFLTEIIEPLVLCHKELDSMQDCIHYLEQTLEKHPRASVIFVIADYLRQNKGMDIAIDFVADNLSKHPSIRGLN
RLIYWHLESAHGKVREKLQMLYDITSKFLDNKPIYRCGHCGFGGKHLHWHCPSCKQWGRMKPIHGLEGD

Sequences:

>Translated_389_residues
MINLWPLLLPAAAWSGWWLANRSNSNKDAHVHNRLSREYVVGLNYLLNEQSDKAVDVFIKLLEVDSDTVETHLALGSLFR
RRGEVDRAIRIHQNLIARPQLSIQQRKEALMALGQDYMSAGVFDRAERIFLEVVELGGSRETSSLQGLLAIYQQEKAWEK
ALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRASLMNATIEIKEGRYKQAIRSLKR
VPQQDAEFLTEIIEPLVLCHKELDSMQDCIHYLEQTLEKHPRASVIFVIADYLRQNKGMDIAIDFVADNLSKHPSIRGLN
RLIYWHLESAHGKVREKLQMLYDITSKFLDNKPIYRCGHCGFGGKHLHWHCPSCKQWGRMKPIHGLEGD
>Mature_389_residues
MINLWPLLLPAAAWSGWWLANRSNSNKDAHVHNRLSREYVVGLNYLLNEQSDKAVDVFIKLLEVDSDTVETHLALGSLFR
RRGEVDRAIRIHQNLIARPQLSIQQRKEALMALGQDYMSAGVFDRAERIFLEVVELGGSRETSSLQGLLAIYQQEKAWEK
ALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRASLMNATIEIKEGRYKQAIRSLKR
VPQQDAEFLTEIIEPLVLCHKELDSMQDCIHYLEQTLEKHPRASVIFVIADYLRQNKGMDIAIDFVADNLSKHPSIRGLN
RLIYWHLESAHGKVREKLQMLYDITSKFLDNKPIYRCGHCGFGGKHLHWHCPSCKQWGRMKPIHGLEGD

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=380, Percent_Identity=40, Blast_Score=313, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44586; Mature: 44586

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLWPLLLPAAAWSGWWLANRSNSNKDAHVHNRLSREYVVGLNYLLNEQSDKAVDVFIK
CCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLEVDSDTVETHLALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMALGQDYMSA
HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GVFDRAERIFLEVVELGGSRETSSLQGLLAIYQQEKAWEKALDIIKKLEISTGASFHNQA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRASLMNATIEIKEGRYKQAIRSLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHH
VPQQDAEFLTEIIEPLVLCHKELDSMQDCIHYLEQTLEKHPRASVIFVIADYLRQNKGMD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCE
IAIDFVADNLSKHPSIRGLNRLIYWHLESAHGKVREKLQMLYDITSKFLDNKPIYRCGHC
EEEHHHHHHHHCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
GFGGKHLHWHCPSCKQWGRMKPIHGLEGD
CCCCCEEEEECCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MINLWPLLLPAAAWSGWWLANRSNSNKDAHVHNRLSREYVVGLNYLLNEQSDKAVDVFIK
CCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLEVDSDTVETHLALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMALGQDYMSA
HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GVFDRAERIFLEVVELGGSRETSSLQGLLAIYQQEKAWEKALDIIKKLEISTGASFHNQA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRASLMNATIEIKEGRYKQAIRSLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHH
VPQQDAEFLTEIIEPLVLCHKELDSMQDCIHYLEQTLEKHPRASVIFVIADYLRQNKGMD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCE
IAIDFVADNLSKHPSIRGLNRLIYWHLESAHGKVREKLQMLYDITSKFLDNKPIYRCGHC
EEEHHHHHHHHCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
GFGGKHLHWHCPSCKQWGRMKPIHGLEGD
CCCCCEEEEECCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]