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The map label for this gene is ybfF [C]

Identifier: 54294292

GI number: 54294292

Start: 1512902

End: 1514068

Strand: Direct

Name: ybfF [C]

Synonym: lpl1357

Alternate gene names: 54294292

Gene position: 1512902-1514068 (Clockwise)

Preceding gene: 54294290

Following gene: 54294294

Centisome position: 45.22

GC content: 36.5

Gene sequence:

>1167_bases
ATGTCCAAAGAAAAAGTCGTTATTATTATCCCTACCTACAATGAAGAAGATAATATTCCTAATACGATTGATTTGATTCT
TAAGGAGACTTACTCACTCGCGGATTATCAGGTTGACATTCTTGTATTTGATAGTCACTCCACAGATTCTACAGCCCATA
TAGTTCGAGAGCTAACTTATACCTCTCAACGTGTTCATTTTGCACAAGAACCACAGAAAACTGGACTTGGTTCCGCTTAC
CTGCAAGCGATGAGAATTGCAATAAATGAGTTAAATGCAGATGTTGTATTTGAGTTTGATGCAGATGGTTCTCATCAACC
TTGTTATATTGCTCCAATGTTAGAGCTACTTAAACAGCATGATGTAGTTGTGGGGAGCCGATATATTTCAGGGGGGAGGA
TTCCCTCAAACTGGGCATTCCATCGTAAATTATTATCTGTGGGAGGTAATTGGGTTGCTCGTATGTTATTGACTGGAAAA
TATAAAGATCTTACTTCTGGCTTAAGAGCAATACGTACCAATCTGTTAAAGAAACTATTGCCTTCAAACTTCCTATCCAA
TAATTACGCGTATAAACTTGAGTTATATTGGCTTTTACACAAGGCAAAAGCCAGGATCGTTGAATTTCCTATTCAATTTA
TTGATCGAGAAAAAGGGAAAAGTAAATTACCCAAGAACAGTATGATTGATACTTTGCGTGTTCTTTTTACCCTTCGCTTC
AGAGAATTACGCCAGTACTTAACTATGTGCTGTGTGGGCTCCATCGGTGCATTGATTCAATTCAGCTTATATAATTGGTT
GCGCAGTTCGAACCATTCCGCTCTGGTATCCAGCCAAGTTGCTATCAGTGCTGCTATTATATCCAATTTTATTTTTCACC
ATTCCATTACATTCAAACAAAAAACTGACTTCCGGATAACTAAAACAACGTTTAGCCGTTTTACACAATTTATTATTTAT
TCCACATTTATGGTTTATTTTCAAAGCCTATGGGTTCATATTTTTGTCCATTCCTTTGGACAAGGTGTTTTGAAAGAAAA
TATCATTGTAGCCTCAGGCTTGGGCATTGGATCTATTATCAATTACCTGTTTTATTCAAATATTATTTGGTCATCAAAAG
GCACTCATTCCCTCAGTTCAAACTCTTCTAAAGAAACTCAAATTTGA

Upstream 100 bases:

>100_bases
CTTTACAATAGCAACTGTCACTTAAAGTTTGTTTACGACAAGTCCACCATTTGATAAGATTTGCTTACTTCTAAAATCTG
CTTCTTATGATCTGATCAGT

Downstream 100 bases:

>100_bases
AAGCAAAAGAGATTGGGGGTATAAGTCCTGTTTCATTTAAATGTCCAGCTTATTACTGCACCAATAGGCGTAAATGATTG
GCTTACCTTTTTCATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSKEKVVIIIPTYNEEDNIPNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRVHFAQEPQKTGLGSAY
LQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGK
YKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQFIIY
STFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSLSSNSSKETQI

Sequences:

>Translated_388_residues
MSKEKVVIIIPTYNEEDNIPNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRVHFAQEPQKTGLGSAY
LQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGK
YKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQFIIY
STFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSLSSNSSKETQI
>Mature_387_residues
SKEKVVIIIPTYNEEDNIPNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRVHFAQEPQKTGLGSAYL
QAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKY
KDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRFR
ELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQFIIYS
TFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSLSSNSSKETQI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=240, Percent_Identity=32.0833333333333, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71999402, Length=241, Percent_Identity=34.8547717842324, Blast_Score=129, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6325441, Length=232, Percent_Identity=27.1551724137931, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24585265, Length=238, Percent_Identity=32.3529411764706, Blast_Score=121, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 44284; Mature: 44152

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEKVVIIIPTYNEEDNIPNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTY
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHH
TSQRVHFAQEPQKTGLGSAYLQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQH
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHC
DVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLKKLL
CEEEECEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
CHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEE
KTDFRITKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSII
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHH
NYLFYSNIIWSSKGTHSLSSNSSKETQI
HHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKEKVVIIIPTYNEEDNIPNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTY
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHH
TSQRVHFAQEPQKTGLGSAYLQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQH
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHC
DVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLKKLL
CEEEECEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
CHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEE
KTDFRITKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSII
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHH
NYLFYSNIIWSSKGTHSLSSNSSKETQI
HHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]