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The map label for this gene is yisS [H]

Identifier: 54294258

GI number: 54294258

Start: 1479917

End: 1480879

Strand: Reverse

Name: yisS [H]

Synonym: lpl1323

Alternate gene names: 54294258

Gene position: 1480879-1479917 (Counterclockwise)

Preceding gene: 54294260

Following gene: 54294257

Centisome position: 44.26

GC content: 39.56

Gene sequence:

>963_bases
ATGAATAAAATTCGTTGTGCAGTTATTGGTGTTGGTTATCTTGGCAGGTTTCATGCCCAAAAATATCAACTAATTCCTAA
TGCAGAGTTAGTTGCAGTTTGTGATGTAAACTCTACAGTCTGCGAAGCGGTATCCAGTGAGTTAAATGTTCCGGCATACA
TCAATTACCATGACCTGTTTGGCAAAGTAGACGCTGTCAGTATCGCAGCGACTACCAATAAGCATTTTGAAATTGCAAAA
TTCTGTTTACAGCATGGGATACATGTTCTGATTGAAAAACCGATTACTGAAACAGTGTCCCAGGCTGAGGAACTGATTCG
ACTTGCAAAACAACATCAGGTGAAGTTACAAGTAGGCCATTTAGAACGCTTCAATTCTGCTCGCCTTGCCCTGGATGAAT
ATCTGGAATTACCATTATTTATAGAATCGCAGAGGCTCGCACCTTTTAACCCCCGTGGAACTGATGTAAACGTGATACTT
GATTTGATGATTCACGACATAGATATTATTCAAAATATAGTTCAAAGCCCTATTAAATCCATTACGGCTCAAGGAGCACC
GGTATTAACAAAAGCAATTGATATAGCTAATGCACGCATAAGCTTTGCTAACCACTGCGTAGCAAATGTTACAGCCAGCA
GAATCAGTTTCAAAACGGAACGAAAAACAAGAATCTTTCAGGAGAATTCTTATATTTCAATTGATTACCAAAACAAACAG
CTTGCCGTATTTAAAAAAGGCAAGGGAGAAATGTTCCCAGGGATACCTGATATCACCAGAGATCAAAGGGAGTTTGAAAA
AGGAGATGCGTTACTGGAGGAAATCAGAGCTTTCTTAAATTGCATAGAAAATGATAGCGTGCCGCTTGTTACAGGTGAAG
AAGGAAGGGATGCTTTGAAAACAGCCGAACAAATCACCGCTTTAATTAATAATAACCTTGTGGAACGCTATGCCGAATGC
TAG

Upstream 100 bases:

>100_bases
TCAATTACTATATAACTGGCATGATAACATAGGAAATACAATTGATTTATCACTAAGGAAATGCGATCATAAGTACAAAT
AATTATCAATTGATGATGAG

Downstream 100 bases:

>100_bases
TCGTGTTGTCATAGTGGCAGGCGAAGAATCTGGTGACCACCATGCTGCCGAGCTGGTAAAGCAATTAAAAGCAGTTTATC
CGGACCTGGAAATTAGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNKIRCAVIGVGYLGRFHAQKYQLIPNAELVAVCDVNSTVCEAVSSELNVPAYINYHDLFGKVDAVSIAATTNKHFEIAK
FCLQHGIHVLIEKPITETVSQAEELIRLAKQHQVKLQVGHLERFNSARLALDEYLELPLFIESQRLAPFNPRGTDVNVIL
DLMIHDIDIIQNIVQSPIKSITAQGAPVLTKAIDIANARISFANHCVANVTASRISFKTERKTRIFQENSYISIDYQNKQ
LAVFKKGKGEMFPGIPDITRDQREFEKGDALLEEIRAFLNCIENDSVPLVTGEEGRDALKTAEQITALINNNLVERYAEC

Sequences:

>Translated_320_residues
MNKIRCAVIGVGYLGRFHAQKYQLIPNAELVAVCDVNSTVCEAVSSELNVPAYINYHDLFGKVDAVSIAATTNKHFEIAK
FCLQHGIHVLIEKPITETVSQAEELIRLAKQHQVKLQVGHLERFNSARLALDEYLELPLFIESQRLAPFNPRGTDVNVIL
DLMIHDIDIIQNIVQSPIKSITAQGAPVLTKAIDIANARISFANHCVANVTASRISFKTERKTRIFQENSYISIDYQNKQ
LAVFKKGKGEMFPGIPDITRDQREFEKGDALLEEIRAFLNCIENDSVPLVTGEEGRDALKTAEQITALINNNLVERYAEC
>Mature_320_residues
MNKIRCAVIGVGYLGRFHAQKYQLIPNAELVAVCDVNSTVCEAVSSELNVPAYINYHDLFGKVDAVSIAATTNKHFEIAK
FCLQHGIHVLIEKPITETVSQAEELIRLAKQHQVKLQVGHLERFNSARLALDEYLELPLFIESQRLAPFNPRGTDVNVIL
DLMIHDIDIIQNIVQSPIKSITAQGAPVLTKAIDIANARISFANHCVANVTASRISFKTERKTRIFQENSYISIDYQNKQ
LAVFKKGKGEMFPGIPDITRDQREFEKGDALLEEIRAFLNCIENDSVPLVTGEEGRDALKTAEQITALINNNLVERYAEC

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=215, Percent_Identity=29.3023255813954, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35818; Mature: 35818

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIRCAVIGVGYLGRFHAQKYQLIPNAELVAVCDVNSTVCEAVSSELNVPAYINYHDLF
CCCEEEEEEEEHHHHHHHCHHEEECCCCCEEEEECCCHHHHHHHHHHCCCCEEEEHHHHH
GKVDAVSIAATTNKHFEIAKFCLQHGIHVLIEKPITETVSQAEELIRLAKQHQVKLQVGH
CCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEEECH
LERFNSARLALDEYLELPLFIESQRLAPFNPRGTDVNVILDLMIHDIDIIQNIVQSPIKS
HHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAQGAPVLTKAIDIANARISFANHCVANVTASRISFKTERKTRIFQENSYISIDYQNKQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHEEECCCEEEEEECCCE
LAVFKKGKGEMFPGIPDITRDQREFEKGDALLEEIRAFLNCIENDSVPLVTGEEGRDALK
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
TAEQITALINNNLVERYAEC
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKIRCAVIGVGYLGRFHAQKYQLIPNAELVAVCDVNSTVCEAVSSELNVPAYINYHDLF
CCCEEEEEEEEHHHHHHHCHHEEECCCCCEEEEECCCHHHHHHHHHHCCCCEEEEHHHHH
GKVDAVSIAATTNKHFEIAKFCLQHGIHVLIEKPITETVSQAEELIRLAKQHQVKLQVGH
CCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEEECH
LERFNSARLALDEYLELPLFIESQRLAPFNPRGTDVNVILDLMIHDIDIIQNIVQSPIKS
HHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAQGAPVLTKAIDIANARISFANHCVANVTASRISFKTERKTRIFQENSYISIDYQNKQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHEEECCCEEEEEECCCE
LAVFKKGKGEMFPGIPDITRDQREFEKGDALLEEIRAFLNCIENDSVPLVTGEEGRDALK
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
TAEQITALINNNLVERYAEC
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]