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The map label for this gene is lspG [H]

Identifier: 54294248

GI number: 54294248

Start: 1468883

End: 1469305

Strand: Reverse

Name: lspG [H]

Synonym: lpl1313

Alternate gene names: 54294248

Gene position: 1469305-1468883 (Counterclockwise)

Preceding gene: 54294249

Following gene: 54294247

Centisome position: 43.92

GC content: 40.66

Gene sequence:

>423_bases
ATGAATCGACAAAAAGGCTTTTCTTTGATCGAAATTATGGTTGTTGTCGTGATTTTAGGCATATTGGCATCTATAGTTGT
CCCCAAGATCATGGGGCGTCCGGATGAAGCCCGTAAAGTCAAAGCGAAACAAGATGTTTTAGCCATTCAAAATGCACTCG
ATTTATACAAACTTGACAATGGTTCATACCCTACAACTGATCAAGGTTTAATGGCTCTGGTAGAAAAACCAACAAGCAAT
CCTGTTCCAACGAATTGGAAACAATATCTGAAATCATTGCCAAAAGATCCATGGGGCAGAGAATATCTTTATTTAAACCC
AGGACAACATACTGACGTTGATGTCTTTACTTATGGAGCAGCAGGACAACCTGGCGGAACAGGGATTAATGCGGAGATTG
GTAACTGGGATGACCACTCATAA

Upstream 100 bases:

>100_bases
AGCAGAGGAAGGGTTATCCGCACCCTTTTAAAATTTAAGTCTATTCATAGGTATCAATATTTGTGTTATAATTTAACATT
TAGTTTCAAGAGGTACACAA

Downstream 100 bases:

>100_bases
GGGTTTTACCCTGATAGAAATTCTTATTGTCATAGTGATTATAGGTATAACCTTGGGGTTTGCCTTAATCGCTTTTGGTG
ATTTCGGGGAAAGCAGACGT

Product: type II secretory pathway protein LspG

Products: NA

Alternate protein names: Cholera toxin secretion protein epsG [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNRQKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDNGSYPTTDQGLMALVEKPTSN
PVPTNWKQYLKSLPKDPWGREYLYLNPGQHTDVDVFTYGAAGQPGGTGINAEIGNWDDHS

Sequences:

>Translated_140_residues
MNRQKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDNGSYPTTDQGLMALVEKPTSN
PVPTNWKQYLKSLPKDPWGREYLYLNPGQHTDVDVFTYGAAGQPGGTGINAEIGNWDDHS
>Mature_140_residues
MNRQKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDNGSYPTTDQGLMALVEKPTSN
PVPTNWKQYLKSLPKDPWGREYLYLNPGQHTDVDVFTYGAAGQPGGTGINAEIGNWDDHS

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for secretion of cholera toxin through the outer membrane [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP G family [H]

Homologues:

Organism=Escherichia coli, GI1789725, Length=137, Percent_Identity=51.0948905109489, Blast_Score=126, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR013545
- InterPro:   IPR010054 [H]

Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 15424; Mature: 15424

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCC
GSYPTTDQGLMALVEKPTSNPVPTNWKQYLKSLPKDPWGREYLYLNPGQHTDVDVFTYGA
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECC
AGQPGGTGINAEIGNWDDHS
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRQKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCC
GSYPTTDQGLMALVEKPTSNPVPTNWKQYLKSLPKDPWGREYLYLNPGQHTDVDVFTYGA
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECC
AGQPGGTGINAEIGNWDDHS
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]