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The map label for this gene is ybeQ [H]

Identifier: 54294242

GI number: 54294242

Start: 1462505

End: 1463635

Strand: Direct

Name: ybeQ [H]

Synonym: lpl1307

Alternate gene names: 54294242

Gene position: 1462505-1463635 (Clockwise)

Preceding gene: 54294241

Following gene: 54294250

Centisome position: 43.71

GC content: 41.64

Gene sequence:

>1131_bases
ATGCGAGGTTTTTTGTTAGCTCTATTATTGTCGATTAACACTGCTGTTTTGGCCGATGAGTTAGTTGGTTTTGCAGCATT
TGAAAATGGCGACTACACCACAGCCTATCCACATTTAATGCAGGCTGCCAAAGATGGTAATGAGGAAGCCATGTATTTAT
TGGGGCGCATGTATCAATACGGATATGGTGTGACAACTAACTACGAAGAAGCCAGAAATTGGTATCAAAAGGCAGCTGAT
AAAAATGATGCATTAGCCCAATTAAGTTTGGGATTTATGTACGATACAGGTAAGGGGGTATCTCAGGATTTTGCTGAGGC
CTTCAAATGGTATATGAAGGCAGCAGAGCAAGGAAATCCGATAGCACAAAGAAATATCGGATTAATGTATGCCACAGGAG
ATGGTGTAACTGCCAGTGATGATAAAGCATTCACCTGGTTTAAAAAGGCGGCAGAACAAGGCTATAGCAAGGCACAAGTG
AATTTGGGTTATCAATACATGATGGGTAAAGGAACTCCAAAAGATGTAAAAAAAGCATTTGAATGGTATCAAAAAGCGGC
AGAGCAGGGGGATGAAAAGGGCGAATACAGTTTAGGTCTATTGTATACAGGCCAGGAAGGTGGGATTAGTGCGGATGATA
AAGCCGCTTTTTACTGGTTTTCGCAAGCAGCCAATCATGGACATGTCAACGCACAAACCTATTTAGCTTACTACTATCTT
AAAGGGTATGGTGTAGATGCTGATCCTGTGAAAGCAGCTTATTGGTATCAATCTGCAGCAGAAAAGGGGCAACCTGAAGC
ACAGGCACAATTGGGACAATTGTTATTGACAGGTACAGGTGTTGATAAAGATTACCAACAGGCAGCTTACTGGTTTGGTA
AGTCAGCGCATCAGGGTAATCCTGTTGGACAAGCCAAATTGGGGTACATGTATTTAGCAGGATTAGGAGTCAACAAGAGC
TTGGTTAAAGCTTACGCCTGGTTAAAAATTGCTGCTGAAAATAAAAATGAGGAAGCGGCAAAGCAACTTAAATCTTTGGA
AGTCAAGTTGGCCGAACCTGAAAAATTGGAAGCAGAGAAAATGATCAAGGATTTGGGCCCATTAGAAAGCAAAGAGAATT
ATGAGGACTAA

Upstream 100 bases:

>100_bases
GAGATTTTTTTAAATTTTTCCACGCGTTAACCGAACAATTACTTGCTTTGTTGTTTCTTTATTCTACGCTTAAATTAAAA
GGAAATAAAATGGAGCAAGT

Downstream 100 bases:

>100_bases
AGTTAAAAACTGAATCCAGAAGATTATAGTTGTAACTTGATAATTTGTTGTGTGTTTAAAAATACTGGTTTAAATGAGCT
AGTTCAATTGATGAGTAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRGFLLALLLSINTAVLADELVGFAAFENGDYTTAYPHLMQAAKDGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAAD
KNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQV
NLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYL
KGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKS
LVKAYAWLKIAAENKNEEAAKQLKSLEVKLAEPEKLEAEKMIKDLGPLESKENYED

Sequences:

>Translated_376_residues
MRGFLLALLLSINTAVLADELVGFAAFENGDYTTAYPHLMQAAKDGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAAD
KNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQV
NLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYL
KGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKS
LVKAYAWLKIAAENKNEEAAKQLKSLEVKLAEPEKLEAEKMIKDLGPLESKENYED
>Mature_376_residues
MRGFLLALLLSINTAVLADELVGFAAFENGDYTTAYPHLMQAAKDGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAAD
KNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQV
NLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYL
KGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQAKLGYMYLAGLGVNKS
LVKAYAWLKIAAENKNEEAAKQLKSLEVKLAEPEKLEAEKMIKDLGPLESKENYED

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=332, Percent_Identity=29.2168674698795, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI19923669, Length=347, Percent_Identity=26.8011527377522, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI217330658, Length=173, Percent_Identity=32.3699421965318, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI217330656, Length=173, Percent_Identity=32.3699421965318, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI154689719, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI33620759, Length=233, Percent_Identity=32.1888412017167, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI87081769, Length=262, Percent_Identity=38.5496183206107, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1786867, Length=129, Percent_Identity=37.2093023255814, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=313, Percent_Identity=27.7955271565495, Blast_Score=110, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6319410, Length=296, Percent_Identity=29.7297297297297, Blast_Score=83, Evalue=7e-17,
Organism=Drosophila melanogaster, GI21355295, Length=314, Percent_Identity=31.5286624203822, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 41652; Mature: 41652

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFLLALLLSINTAVLADELVGFAAFENGDYTTAYPHLMQAAKDGNEEAMYLLGRMYQY
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
GYGVTTNYEEARNWYQKAADKNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNP
CCCCCCCHHHHHHHHHHHCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
IAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAF
CHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEEECCCCHHHHHHHH
EWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYL
HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHCCCCCCCCHHHEEEEEEE
KGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGN
ECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCC
PVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEVKLAEPEKLEAEK
CCCCHHHCEEEEECCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHEEEECCCCHHHHHH
MIKDLGPLESKENYED
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRGFLLALLLSINTAVLADELVGFAAFENGDYTTAYPHLMQAAKDGNEEAMYLLGRMYQY
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
GYGVTTNYEEARNWYQKAADKNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNP
CCCCCCCHHHHHHHHHHHCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
IAQRNIGLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAF
CHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEEECCCCHHHHHHHH
EWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYL
HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHCCCCCCCCHHHEEEEEEE
KGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGN
ECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCC
PVGQAKLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSLEVKLAEPEKLEAEK
CCCCHHHCEEEEECCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHEEEECCCCHHHHHH
MIKDLGPLESKENYED
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]