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The map label for this gene is 54294207

Identifier: 54294207

GI number: 54294207

Start: 1416490

End: 1416804

Strand: Direct

Name: 54294207

Synonym: lpl1272

Alternate gene names: NA

Gene position: 1416490-1416804 (Clockwise)

Preceding gene: 54294206

Following gene: 54294210

Centisome position: 42.34

GC content: 32.38

Gene sequence:

>315_bases
ATGGCAAACCAAACACGTGAAAATTTAATTAATAAGGCAAAGAGCGGGTCTGAATCTATCGCGTTAATTTATTCTCCCAT
AGAACTTCATGAATATATTGTTGAAATTATTTCTAAAGATTCAGATCACTTTATCTATAAAGGAAAGGAAATATGTCATT
TTAATTCGATTGATGAAGCGGTGTCTCGTGCTACCGAATTAGGGGCAAAAGAGTTTTTTCTTTGTGCAGATAATACATAT
GATGAATGTGGTTCTGCAAATTCTGTGCAACACTTTGATTATATACCTATTTATTCTAAATTTAAGCGCACTTGA

Upstream 100 bases:

>100_bases
TTAACCTTTTTATTCTAATTTAGGCCATACAGCGGATGTCTTTAAATTTCCAGGCAAAAATATGGCTATAATTATATATA
ATTTGCTTGGGAATTAAGTA

Downstream 100 bases:

>100_bases
GATCATTATGATTTTTGGAAGTTTAAAACCAGCATAGAATTCAGAAGTTAAATAATGTGTGGAATAGGACTTAACATTAG
CCTTTGTACTGGGAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MANQTRENLINKAKSGSESIALIYSPIELHEYIVEIISKDSDHFIYKGKEICHFNSIDEAVSRATELGAKEFFLCADNTY
DECGSANSVQHFDYIPIYSKFKRT

Sequences:

>Translated_104_residues
MANQTRENLINKAKSGSESIALIYSPIELHEYIVEIISKDSDHFIYKGKEICHFNSIDEAVSRATELGAKEFFLCADNTY
DECGSANSVQHFDYIPIYSKFKRT
>Mature_103_residues
ANQTRENLINKAKSGSESIALIYSPIELHEYIVEIISKDSDHFIYKGKEICHFNSIDEAVSRATELGAKEFFLCADNTYD
ECGSANSVQHFDYIPIYSKFKRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11860; Mature: 11729

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQTRENLINKAKSGSESIALIYSPIELHEYIVEIISKDSDHFIYKGKEICHFNSIDEA
CCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHH
VSRATELGAKEFFLCADNTYDECGSANSVQHFDYIPIYSKFKRT
HHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
ANQTRENLINKAKSGSESIALIYSPIELHEYIVEIISKDSDHFIYKGKEICHFNSIDEA
CCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHH
VSRATELGAKEFFLCADNTYDECGSANSVQHFDYIPIYSKFKRT
HHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA