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The map label for this gene is 54294115

Identifier: 54294115

GI number: 54294115

Start: 1316558

End: 1316977

Strand: Direct

Name: 54294115

Synonym: lpl1179

Alternate gene names: NA

Gene position: 1316558-1316977 (Clockwise)

Preceding gene: 54294114

Following gene: 54294116

Centisome position: 39.35

GC content: 34.52

Gene sequence:

>420_bases
ATGAGATTTCAAGATTCTGACTTTGAAGAACGTTATAATACAATGTGGAATAAAATTGCAGTGTCTGCTGATGTTCAAAT
AAGGCAATTATTTGGTGCCAAAGGATTTTTTAGTGAACAGCAGCCCAATTACTATCAACTCCTTGTAAACTATGCTCAAG
CGGCCAAAAATATTGTCGATAATTTAAATCGTCAATCTCCCATGTTTGATGACAAAGAATATGTTGAAGGCTATATGATT
GCTACTCTCCAATCGGTATATAAAGATTTTTCTCAATATAAACCGAGAATTGCAGGGCGTTATGGAGAGCACTCAAGCTG
TATTGAACTGATTAACAAGACCTTGGATTGGGTACAATCCTTTGATTTAAAATTAGAAAACCTCTCTGAGTCTGATGATG
AGATGAAAATTACTTTCTAA

Upstream 100 bases:

>100_bases
TGGGGCCCAAGAAGAGTAATGGTTAAATTAGGTTGCTCTTAATCTTCACATAATAAATTTTTAGTATTATATGCCATGTT
TTTGTACATGGTGAATTAAT

Downstream 100 bases:

>100_bases
TTGCAAGCTATTCTGTATTACGAGAAGTCTGTAATGCGGGATAGCAACATTTCTCTATTACATCTTACTCCTAATAGATG
CACTTTGCTTGTCTGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRFQDSDFEERYNTMWNKIAVSADVQIRQLFGAKGFFSEQQPNYYQLLVNYAQAAKNIVDNLNRQSPMFDDKEYVEGYMI
ATLQSVYKDFSQYKPRIAGRYGEHSSCIELINKTLDWVQSFDLKLENLSESDDEMKITF

Sequences:

>Translated_139_residues
MRFQDSDFEERYNTMWNKIAVSADVQIRQLFGAKGFFSEQQPNYYQLLVNYAQAAKNIVDNLNRQSPMFDDKEYVEGYMI
ATLQSVYKDFSQYKPRIAGRYGEHSSCIELINKTLDWVQSFDLKLENLSESDDEMKITF
>Mature_139_residues
MRFQDSDFEERYNTMWNKIAVSADVQIRQLFGAKGFFSEQQPNYYQLLVNYAQAAKNIVDNLNRQSPMFDDKEYVEGYMI
ATLQSVYKDFSQYKPRIAGRYGEHSSCIELINKTLDWVQSFDLKLENLSESDDEMKITF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16403; Mature: 16403

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFQDSDFEERYNTMWNKIAVSADVQIRQLFGAKGFFSEQQPNYYQLLVNYAQAAKNIVD
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NLNRQSPMFDDKEYVEGYMIATLQSVYKDFSQYKPRIAGRYGEHSSCIELINKTLDWVQS
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHH
FDLKLENLSESDDEMKITF
HCCHHHCCCCCCCCEEECC
>Mature Secondary Structure
MRFQDSDFEERYNTMWNKIAVSADVQIRQLFGAKGFFSEQQPNYYQLLVNYAQAAKNIVD
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NLNRQSPMFDDKEYVEGYMIATLQSVYKDFSQYKPRIAGRYGEHSSCIELINKTLDWVQS
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHH
FDLKLENLSESDDEMKITF
HCCHHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA