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The map label for this gene is udk [H]

Identifier: 54294109

GI number: 54294109

Start: 1307889

End: 1308605

Strand: Direct

Name: udk [H]

Synonym: lpl1173

Alternate gene names: 54294109

Gene position: 1307889-1308605 (Clockwise)

Preceding gene: 54294108

Following gene: 54294111

Centisome position: 39.09

GC content: 34.03

Gene sequence:

>717_bases
ATGGCTTTTTTGACCGCAAGAGAATATTACGTGTCTAAATTTATCTTTGTCATTGGAGGAACTGGAACTGGAAAAACGAC
TGTTTCAGAAGAAATTAAGACAATAGCAGAAGCACAAAATTTCACGGTTACGCTATTAAGTCTGGATCATTACTACTTGC
CCCAAAGTATGATGGATCCGGACAAACCAAAGAATTTTGATGTCCCTGAAGCTTTGGAACAAACATTAATTCAACAGCAT
TTGCAGGATTTAGAAGCTGGTAAAACCATATTCAGACCGACCTATGATATGGAAAGCAGTGACAGAGTATTGAATGGGGA
AATGAAAATTATTCCTGCTGATATCATTATTGTCGAAGGAATTTTTGCTGGTGAGTATTTATCCTCTTTAAGGAATCAAA
CAGAAAAACTCAAAATTTATTTACAATCCAATCAAATAAATGACAATTACACAAGGAAGGAAGACAGAGATATAGTTGAA
AGAAAAAGATCATCGGCTTATGCCCCTGTTGCGAAAAAGAACCAAATGGCAGGATTTTTTAGATATGTCGCTCCCCATAT
GATTTCTTCAAATATGGTCATTGATAATCCTTGGCTTCCTCAACAAAACATGACTACTACCGAAAAACTTCCTTTGATTG
CAGGCAATAACTTAATAAAATTAAATGAATTTTTATCTTCAACTGAGAGTCATTTTTTATATAAAACATATAGTTAA

Upstream 100 bases:

>100_bases
ATGGTTTGCTTTGTAAGCTTTGGAGTGCCGGATTTGGCTTGAGGGCTTATCAAGGTACAGATTGATCGGTTCTCTTGTAA
TTTGTTCCTCAGTTATTATA

Downstream 100 bases:

>100_bases
AATGTAACTTATTGCCCCAGGGGATAATTTAGGGGCAATATAAAATGCAATATTTAAAATTGAGTTAAAAGTTCAGTAAT
TCCTTTTTAGGATTACAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTLLSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQH
LQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVE
RKRSSAYAPVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS

Sequences:

>Translated_238_residues
MAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTLLSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQH
LQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVE
RKRSSAYAPVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS
>Mature_237_residues
AFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTLLSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQHL
QDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVER
KRSSAYAPVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17539892, Length=194, Percent_Identity=29.8969072164948, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17539894, Length=194, Percent_Identity=29.8969072164948, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 27229; Mature: 27098

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTLLSLDHYYLPQSMMDP
CCEEHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
DKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCEEEEEEEEEEEEC
IFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAYAPVAKKNQMAGFF
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS
HHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCEEEHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
AFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTLLSLDHYYLPQSMMDP
CEEHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
DKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCEEEEEEEEEEEEC
IFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAYAPVAKKNQMAGFF
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLIAGNNLIKLNEFLSSTESHFLYKTYS
HHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCEEEHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA