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The map label for this gene is 54293950

Identifier: 54293950

GI number: 54293950

Start: 1141239

End: 1142081

Strand: Reverse

Name: 54293950

Synonym: lpl1007

Alternate gene names: NA

Gene position: 1142081-1141239 (Counterclockwise)

Preceding gene: 54293952

Following gene: 54293942

Centisome position: 34.14

GC content: 32.62

Gene sequence:

>843_bases
ATGAAAATCAAATTATCAATCCTTTTATTCTTGTTAATGGTTTTAAAAACTTATGCATCTACCGCTTTTTTTCCAAAAAC
GATAAATGTATGGAACTCAAAAGAACAGGCAAAAATAATAGGTAATTGTGAAAATCAAGATAAAGGATCTTCGGATAATT
CTCTTCCTAAGAGAATCCGTTGTCAGTTCACACAAATTAGTATTAAACATGAACCTCCAATTAAATCAAAAATGAATGCC
AAGGAAACACTAGAGTTCTATCTGAATTCTCGCAAAGTGAAGTCTATTGAGGAATTAAAAAGAATATTATGCGCGGAGTT
CAATAAGAGCCCAGAACTAGAAGATTTGAGCGATCCATTTGGTAAAAAAAGATATCAATCTTTTGTTCATTTATGCCAAA
AGGATGGGAACATAAGTGAGTTTATTAAATCAGAAGTGGATAATTGGTCTGAAAACATAGTTAACATTAAGGAATGCTCA
CTATCAACGCAAATTTACTCTTTAGATTTTAAGCATTCATCTACAAATAATGACTGGATTTCTACAACAGAACCACAGCG
CAATTTCTGTGGAATGATTGTGGTCACACGGTTGCATCTCGACCCAGAAAGTCCTTTTTGGCATTACTCAGATACCCACA
TTGTCACAAATCCAGAAGATAGTTTTGGGACATTGCCATCAGCGGATAATTCTTGTAGTAAGTTGCCAAAATCAACCACA
ACCACTTTTTATGGAGTACAAAAATTCATCAAAGAAAAAGGTTTTAATGCCAATGATATATCTTCCTCGAGAAATACTAT
CTTTGTTAAATGCGATAGATTAAATCTATTAAATTCAATATAA

Upstream 100 bases:

>100_bases
TATAATGCTTCTTTATTACTTTATCTGAGCACTAGAGTTTGACTTGTATCCAATACGTGGTTGATTTATTATCGTCAGCC
TGGACAATTTTGGATCATCC

Downstream 100 bases:

>100_bases
AATTATTGCTCTTGCAGTATCGATTTGGTTCCTAGGACTTAAGGAAACTGGGGAATGGCGAGCATGGATTTCTTTTATCT
AATCCCAAGTTAATTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKIKLSILLFLLMVLKTYASTAFFPKTINVWNSKEQAKIIGNCENQDKGSSDNSLPKRIRCQFTQISIKHEPPIKSKMNA
KETLEFYLNSRKVKSIEELKRILCAEFNKSPELEDLSDPFGKKRYQSFVHLCQKDGNISEFIKSEVDNWSENIVNIKECS
LSTQIYSLDFKHSSTNNDWISTTEPQRNFCGMIVVTRLHLDPESPFWHYSDTHIVTNPEDSFGTLPSADNSCSKLPKSTT
TTFYGVQKFIKEKGFNANDISSSRNTIFVKCDRLNLLNSI

Sequences:

>Translated_280_residues
MKIKLSILLFLLMVLKTYASTAFFPKTINVWNSKEQAKIIGNCENQDKGSSDNSLPKRIRCQFTQISIKHEPPIKSKMNA
KETLEFYLNSRKVKSIEELKRILCAEFNKSPELEDLSDPFGKKRYQSFVHLCQKDGNISEFIKSEVDNWSENIVNIKECS
LSTQIYSLDFKHSSTNNDWISTTEPQRNFCGMIVVTRLHLDPESPFWHYSDTHIVTNPEDSFGTLPSADNSCSKLPKSTT
TTFYGVQKFIKEKGFNANDISSSRNTIFVKCDRLNLLNSI
>Mature_280_residues
MKIKLSILLFLLMVLKTYASTAFFPKTINVWNSKEQAKIIGNCENQDKGSSDNSLPKRIRCQFTQISIKHEPPIKSKMNA
KETLEFYLNSRKVKSIEELKRILCAEFNKSPELEDLSDPFGKKRYQSFVHLCQKDGNISEFIKSEVDNWSENIVNIKECS
LSTQIYSLDFKHSSTNNDWISTTEPQRNFCGMIVVTRLHLDPESPFWHYSDTHIVTNPEDSFGTLPSADNSCSKLPKSTT
TTFYGVQKFIKEKGFNANDISSSRNTIFVKCDRLNLLNSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32119; Mature: 32119

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKLSILLFLLMVLKTYASTAFFPKTINVWNSKEQAKIIGNCENQDKGSSDNSLPKRIR
CEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHEECCCCCCCCCCCCCCCCHHHE
CQFTQISIKHEPPIKSKMNAKETLEFYLNSRKVKSIEELKRILCAEFNKSPELEDLSDPF
EEEEEEEECCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHH
GKKRYQSFVHLCQKDGNISEFIKSEVDNWSENIVNIKECSLSTQIYSLDFKHSSTNNDWI
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHCCCEEEEEEEECCCCCCCCCC
STTEPQRNFCGMIVVTRLHLDPESPFWHYSDTHIVTNPEDSFGTLPSADNSCSKLPKSTT
CCCCCCHHHHHEEEEEEEECCCCCCCEECCCCEEEECCCCCCCCCCCCCCHHHHCCCCCC
TTFYGVQKFIKEKGFNANDISSSRNTIFVKCDRLNLLNSI
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCC
>Mature Secondary Structure
MKIKLSILLFLLMVLKTYASTAFFPKTINVWNSKEQAKIIGNCENQDKGSSDNSLPKRIR
CEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHEECCCCCCCCCCCCCCCCHHHE
CQFTQISIKHEPPIKSKMNAKETLEFYLNSRKVKSIEELKRILCAEFNKSPELEDLSDPF
EEEEEEEECCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHH
GKKRYQSFVHLCQKDGNISEFIKSEVDNWSENIVNIKECSLSTQIYSLDFKHSSTNNDWI
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHCCCEEEEEEEECCCCCCCCCC
STTEPQRNFCGMIVVTRLHLDPESPFWHYSDTHIVTNPEDSFGTLPSADNSCSKLPKSTT
CCCCCCHHHHHEEEEEEEECCCCCCCEECCCCEEEECCCCCCCCCCCCCCHHHHCCCCCC
TTFYGVQKFIKEKGFNANDISSSRNTIFVKCDRLNLLNSI
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA