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The map label for this gene is 54293940

Identifier: 54293940

GI number: 54293940

Start: 1128576

End: 1130270

Strand: Reverse

Name: 54293940

Synonym: lpl0997

Alternate gene names: NA

Gene position: 1130270-1128576 (Counterclockwise)

Preceding gene: 54293942

Following gene: 54293936

Centisome position: 33.78

GC content: 35.75

Gene sequence:

>1695_bases
ATGGGTGGCTTAACTAGCGAGCAATATCACAGTCAAGTAGTCGGTAAAATCGGATATATCGCCAGATGCATGCAAACTAT
AGATCCTGAAAATAATTTGAAAAAAATAAGAGAGGATTACCAAGATGTATTGATATGGGCAGAGAAAAATTATCGTTTTG
AGGAGATATTGGAAGCCAGCAAATCTGGAAAATGCCCTAATGATCTGGATGCATTAAGTCGACGATCGCTAATACTCCAA
GAATTGCTGCGGCTTGTTTCATCAATTAGTCCATTTAAAATGAAATTAGACCTGATTGAGTCTCAATATGAAAAAATGAA
GCAGCATGTGAATTTATGGAAAAGTGATTACCATGTAAAACTAAATCAACTGAATCAATTAACAGATTACCTCAAAAATG
CAGCACCAACTCCTAAAAATCATTTTCTAAGAGCAATGACTTCTGCATTGCAAATGCAGATAGCCCAAACTGGGATTACA
GAAGATAATGAAGGCATCAACCAGTTGTTTAAACTGGGATTGCATTTGCTCGCAATGGCTAACGAAAAAATAAATGAGCA
ATATGACCTGTTTAAAGGGTATGTAAAAGATCAGCCTGAAGAATCTCCTTTTGAAGGCATTTTGCCTGCGGAAGACCAGA
AAATTTTAGTTAAAGCTATGATAGATTATGCCATGCCGAAACTTTCAAGCAAGGTTTTACAAGATAAATTATCGGCACTA
TCCAGTTCCGATGTATTAACAAAAACATTACTTGATAGCATCGACAGAACTGTTGAGGAAAACGAAAAATTAAATGCTTT
AAGCAAAGTCAAATTAGGTAAATTTGGCCTGGATATCAGGGAAGTTGAAGAGATTTACTCTCAAGCTCTGAAAATATCAC
CACAAGATGCTTTGCAATATACCGCTCAACAATGTGATGCCCAATTATTAAGCATGGCATTTCCTGATTCCCAAAATTAC
ATTGTTGAATCTATATCGGACAAAAAGGCCAAGGCCATTGCAGAGCTAATACATAGTAAAGAATTTATTTATCAAATTAT
TAAGACAGAAGTTTTTAAACAAGTTGATCCTAATGAGAAAATTCGACTACAAGCTTCGACAGAATTGTATCAGCTTCTTG
GGAGAATAATGGATAAACAGATCCATCTTTTTGCCAAGATGAATCTCGAACAAATTAATGAATATATTCAAACCAAAACC
AAAGCAATCCTGGATAAAATTCCTGAAAGAGTTGAGTTATTAACTTTTATGGGCTTTGAAATTCCAACTTTCAAGGGAAT
TGAGACACTTATGACCGATATCTCCCATTCTCAGGATAATGAAACTCTGGCGATAGCCCAAGAATTTTATGCAAATATAA
AAAATGCAAAGAAACAATTGCTGGGTGATAAACTGATTGAAGACATTACTCCACAGGATGTAGAGAAATTTTTTAATCAA
TGTAGTCAATACGGTTCAGAAGCAGCTGAAAAGTTAGCTGACAATCGTCCGGTATTGACAAAAATAGCCGATATTTTGAC
AGCAATTGCCCGCTGGGCGATTAGTTTAATAGGTTTCAACACGCCACCGCAGTTTTTGGCTCCAACCAGAACCTGTGTGG
ATCAGGTATCTGATGAAATCACTAAAATTAAACTCAAACTTGAAGATACTTTGGGAAGCTTGCAAAAAGTACATGAAGAG
AACTTAAGCCTTTAA

Upstream 100 bases:

>100_bases
TTACTAAATGGAAACTTTTATATGGCAATACCTTGAGTTTTTTACCCATTATTGATACTATTTGGGCAATTAATTATCTT
TTATCAAGGTGGGTATAAAA

Downstream 100 bases:

>100_bases
TAACGATTAAGTCCACAATAAAAAAATACTTGATATAAGAATTTACCTGTTATCAGAAATGTTCTCCCGGATTACAGCTT
TCCTGTAATCCGGAGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MGGLTSEQYHSQVVGKIGYIARCMQTIDPENNLKKIREDYQDVLIWAEKNYRFEEILEASKSGKCPNDLDALSRRSLILQ
ELLRLVSSISPFKMKLDLIESQYEKMKQHVNLWKSDYHVKLNQLNQLTDYLKNAAPTPKNHFLRAMTSALQMQIAQTGIT
EDNEGINQLFKLGLHLLAMANEKINEQYDLFKGYVKDQPEESPFEGILPAEDQKILVKAMIDYAMPKLSSKVLQDKLSAL
SSSDVLTKTLLDSIDRTVEENEKLNALSKVKLGKFGLDIREVEEIYSQALKISPQDALQYTAQQCDAQLLSMAFPDSQNY
IVESISDKKAKAIAELIHSKEFIYQIIKTEVFKQVDPNEKIRLQASTELYQLLGRIMDKQIHLFAKMNLEQINEYIQTKT
KAILDKIPERVELLTFMGFEIPTFKGIETLMTDISHSQDNETLAIAQEFYANIKNAKKQLLGDKLIEDITPQDVEKFFNQ
CSQYGSEAAEKLADNRPVLTKIADILTAIARWAISLIGFNTPPQFLAPTRTCVDQVSDEITKIKLKLEDTLGSLQKVHEE
NLSL

Sequences:

>Translated_564_residues
MGGLTSEQYHSQVVGKIGYIARCMQTIDPENNLKKIREDYQDVLIWAEKNYRFEEILEASKSGKCPNDLDALSRRSLILQ
ELLRLVSSISPFKMKLDLIESQYEKMKQHVNLWKSDYHVKLNQLNQLTDYLKNAAPTPKNHFLRAMTSALQMQIAQTGIT
EDNEGINQLFKLGLHLLAMANEKINEQYDLFKGYVKDQPEESPFEGILPAEDQKILVKAMIDYAMPKLSSKVLQDKLSAL
SSSDVLTKTLLDSIDRTVEENEKLNALSKVKLGKFGLDIREVEEIYSQALKISPQDALQYTAQQCDAQLLSMAFPDSQNY
IVESISDKKAKAIAELIHSKEFIYQIIKTEVFKQVDPNEKIRLQASTELYQLLGRIMDKQIHLFAKMNLEQINEYIQTKT
KAILDKIPERVELLTFMGFEIPTFKGIETLMTDISHSQDNETLAIAQEFYANIKNAKKQLLGDKLIEDITPQDVEKFFNQ
CSQYGSEAAEKLADNRPVLTKIADILTAIARWAISLIGFNTPPQFLAPTRTCVDQVSDEITKIKLKLEDTLGSLQKVHEE
NLSL
>Mature_563_residues
GGLTSEQYHSQVVGKIGYIARCMQTIDPENNLKKIREDYQDVLIWAEKNYRFEEILEASKSGKCPNDLDALSRRSLILQE
LLRLVSSISPFKMKLDLIESQYEKMKQHVNLWKSDYHVKLNQLNQLTDYLKNAAPTPKNHFLRAMTSALQMQIAQTGITE
DNEGINQLFKLGLHLLAMANEKINEQYDLFKGYVKDQPEESPFEGILPAEDQKILVKAMIDYAMPKLSSKVLQDKLSALS
SSDVLTKTLLDSIDRTVEENEKLNALSKVKLGKFGLDIREVEEIYSQALKISPQDALQYTAQQCDAQLLSMAFPDSQNYI
VESISDKKAKAIAELIHSKEFIYQIIKTEVFKQVDPNEKIRLQASTELYQLLGRIMDKQIHLFAKMNLEQINEYIQTKTK
AILDKIPERVELLTFMGFEIPTFKGIETLMTDISHSQDNETLAIAQEFYANIKNAKKQLLGDKLIEDITPQDVEKFFNQC
SQYGSEAAEKLADNRPVLTKIADILTAIARWAISLIGFNTPPQFLAPTRTCVDQVSDEITKIKLKLEDTLGSLQKVHEEN
LSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64268; Mature: 64136

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGLTSEQYHSQVVGKIGYIARCMQTIDPENNLKKIREDYQDVLIWAEKNYRFEEILEAS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHH
KSGKCPNDLDALSRRSLILQELLRLVSSISPFKMKLDLIESQYEKMKQHVNLWKSDYHVK
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LNQLNQLTDYLKNAAPTPKNHFLRAMTSALQMQIAQTGITEDNEGINQLFKLGLHLLAMA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NEKINEQYDLFKGYVKDQPEESPFEGILPAEDQKILVKAMIDYAMPKLSSKVLQDKLSAL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSDVLTKTLLDSIDRTVEENEKLNALSKVKLGKFGLDIREVEEIYSQALKISPQDALQY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
TAQQCDAQLLSMAFPDSQNYIVESISDKKAKAIAELIHSKEFIYQIIKTEVFKQVDPNEK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IRLQASTELYQLLGRIMDKQIHLFAKMNLEQINEYIQTKTKAILDKIPERVELLTFMGFE
EEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPTFKGIETLMTDISHSQDNETLAIAQEFYANIKNAKKQLLGDKLIEDITPQDVEKFFNQ
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
CSQYGSEAAEKLADNRPVLTKIADILTAIARWAISLIGFNTPPQFLAPTRTCVDQVSDEI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHH
TKIKLKLEDTLGSLQKVHEENLSL
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA