Click here to switch to the map view.

The map label for this gene is korB [H]

Identifier: 54293921

GI number: 54293921

Start: 1097117

End: 1098085

Strand: Direct

Name: korB [H]

Synonym: lpl0977

Alternate gene names: 54293921

Gene position: 1097117-1098085 (Clockwise)

Preceding gene: 54293920

Following gene: 54293923

Centisome position: 32.79

GC content: 40.87

Gene sequence:

>969_bases
ATGAACAGCAATTATAAGCGTGAAGATTTTGCGAATGAAACAGAAGTTCGCTGGTGTCCTGGATGTGGTGATTATGCCAT
TTTGGCTGCTTTGCAAAGAGTACTCCCTGAATTAGGTTTGCCTCCTGAGCAACATGTTTTTGTCTCAGGCATAGGGTGTG
CCGGACGGCTTCCTTATTATATGAACACTTACGGATTTCATACTATCCATGGCAGGGCTACAGCAGTAGCAACTGGTTTA
AAGGCAATGCGAGAAGATTTATGTGTCTGGGTTATTACCGGAGATGGGGATGCGTTAAGTATAGGCGGCAATCACTTGCT
GCATATTTTAAGGCGTAATGTCAATGTTAATATACTTCTGTTTAATAATCAGGTTTACGGATTAACCAAGGGGCAATTTT
CTCCAACGTCTCAGAAAGGGCAGGTAACTAAAACATCCCCCAAAGGAGTGACAAGTGAGCCAATCAATCCAATCATGATC
GCTTTGGCTTCCGGAGCCAGTTTTGTAGCCAGAGCGGTTGACAAAGATCCTGTTCATTTGGCTTCTGTGCTTAAAAAAGC
TTATGAACATAAGGGATGCTCTTTTGTTGAAATATACCAAGATTGTAATATTTTTAATCATGGTGCTTTTGATGATTTTG
CAGTTAAAAATAACCGGGCTGAAAACACAATAATATTGGAAGACGGTCAGCCACTCGTATTTGGTGCTCAAAAAGAAAAA
GCGCTGCAGTTGGACGATGAGCAATTTGTACAAATTTCAATTGATGAAAAAACGCTTTATAAGCATGATGAGAAAAACTT
AATTAGCGCCATGCGTTTAGCGCGATTGACGTTCCCTGATTACCCCGTACCTTTGGGAGTATACTATCAAAAGGATCGCG
AGCTTTTTACTCTGAGCCAGGAAGTGAAGAAAAGACCGGAAGATTTGCCAGAACTTTTTAAAGCCAAGGCTAGTTGGAAA
CAAAATTAA

Upstream 100 bases:

>100_bases
AGAGCAGTTTATCTGGTGGATGCGCAATCGATTAGCCAATGCACTGGTCAACCTTTCAGTGTTAATCATTTGGTAAGTGC
CATTAAAGCGGAAGCCAACT

Downstream 100 bases:

>100_bases
TTTCACATCGATTGATCATACTTCTGGATTTTATAATGTAATTATTAGTAACTGTCCAGGGTATGAGAATTTTTCTGCTT
ATAAGCCTATTCATTTGAGT

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNSNYKREDFANETEVRWCPGCGDYAILAALQRVLPELGLPPEQHVFVSGIGCAGRLPYYMNTYGFHTIHGRATAVATGL
KAMREDLCVWVITGDGDALSIGGNHLLHILRRNVNVNILLFNNQVYGLTKGQFSPTSQKGQVTKTSPKGVTSEPINPIMI
ALASGASFVARAVDKDPVHLASVLKKAYEHKGCSFVEIYQDCNIFNHGAFDDFAVKNNRAENTIILEDGQPLVFGAQKEK
ALQLDDEQFVQISIDEKTLYKHDEKNLISAMRLARLTFPDYPVPLGVYYQKDRELFTLSQEVKKRPEDLPELFKAKASWK
QN

Sequences:

>Translated_322_residues
MNSNYKREDFANETEVRWCPGCGDYAILAALQRVLPELGLPPEQHVFVSGIGCAGRLPYYMNTYGFHTIHGRATAVATGL
KAMREDLCVWVITGDGDALSIGGNHLLHILRRNVNVNILLFNNQVYGLTKGQFSPTSQKGQVTKTSPKGVTSEPINPIMI
ALASGASFVARAVDKDPVHLASVLKKAYEHKGCSFVEIYQDCNIFNHGAFDDFAVKNNRAENTIILEDGQPLVFGAQKEK
ALQLDDEQFVQISIDEKTLYKHDEKNLISAMRLARLTFPDYPVPLGVYYQKDRELFTLSQEVKKRPEDLPELFKAKASWK
QN
>Mature_322_residues
MNSNYKREDFANETEVRWCPGCGDYAILAALQRVLPELGLPPEQHVFVSGIGCAGRLPYYMNTYGFHTIHGRATAVATGL
KAMREDLCVWVITGDGDALSIGGNHLLHILRRNVNVNILLFNNQVYGLTKGQFSPTSQKGQVTKTSPKGVTSEPINPIMI
ALASGASFVARAVDKDPVHLASVLKKAYEHKGCSFVEIYQDCNIFNHGAFDDFAVKNNRAENTIILEDGQPLVFGAQKEK
ALQLDDEQFVQISIDEKTLYKHDEKNLISAMRLARLTFPDYPVPLGVYYQKDRELFTLSQEVKKRPEDLPELFKAKASWK
QN

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 36007; Mature: 36007

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNYKREDFANETEVRWCPGCGDYAILAALQRVLPELGLPPEQHVFVSGIGCAGRLPYY
CCCCCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
MNTYGFHTIHGRATAVATGLKAMREDLCVWVITGDGDALSIGGNHLLHILRRNVNVNILL
ECCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCEEEECHHHHHHHHHCCCCEEEEE
FNNQVYGLTKGQFSPTSQKGQVTKTSPKGVTSEPINPIMIALASGASFVARAVDKDPVHL
ECCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHH
ASVLKKAYEHKGCSFVEIYQDCNIFNHGAFDDFAVKNNRAENTIILEDGQPLVFGAQKEK
HHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCEEEEECCCCC
ALQLDDEQFVQISIDEKTLYKHDEKNLISAMRLARLTFPDYPVPLGVYYQKDRELFTLSQ
CEECCCCEEEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHH
EVKKRPEDLPELFKAKASWKQN
HHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSNYKREDFANETEVRWCPGCGDYAILAALQRVLPELGLPPEQHVFVSGIGCAGRLPYY
CCCCCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
MNTYGFHTIHGRATAVATGLKAMREDLCVWVITGDGDALSIGGNHLLHILRRNVNVNILL
ECCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCEEEECHHHHHHHHHCCCCEEEEE
FNNQVYGLTKGQFSPTSQKGQVTKTSPKGVTSEPINPIMIALASGASFVARAVDKDPVHL
ECCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHH
ASVLKKAYEHKGCSFVEIYQDCNIFNHGAFDDFAVKNNRAENTIILEDGQPLVFGAQKEK
HHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCEEEEECCCCC
ALQLDDEQFVQISIDEKTLYKHDEKNLISAMRLARLTFPDYPVPLGVYYQKDRELFTLSQ
CEECCCCEEEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHH
EVKKRPEDLPELFKAKASWKQN
HHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]