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The map label for this gene is ylbC [H]

Identifier: 54293854

GI number: 54293854

Start: 1022102

End: 1022656

Strand: Reverse

Name: ylbC [H]

Synonym: lpl0910

Alternate gene names: 54293854

Gene position: 1022656-1022102 (Counterclockwise)

Preceding gene: 54293855

Following gene: 54293853

Centisome position: 30.57

GC content: 36.94

Gene sequence:

>555_bases
ATGAATCTGATAAAAATTAAATCTAAAACCCTATTCATGGTACTTGTATACAGTTTGCTCTCCCCTGCTTATGCAGCATC
ACACCCCAAAAGCACAGTGAATGACACCGCCATTCAAAATGAAATATTAGTTTATATCAATAATTACCGACAACAGCATG
GCCTGGCTCCTCTCAAAATGGATAACCGCATCGTAAAAGAAGCAAAAATTCATTCCATGGATATGGCAAAACACGCGATA
CCTTTCGGCCATAAATATTTTAAAAAACGTATTGATAAATTACACACACAAATTAAAAACTCAAATGCAGGGGCTGAAAA
CGTGGCTTACAACTATAAAAATGCCCAGGATGTTGTCAAAAACTGGTTACGTAGCCCAGGACACAAAAGAAATATCGTTG
GTAACTATGACCTTACCGGGATAGGTATAGCTCGAGATGAAAAGGGAAAAATATACTTTACTCAAATATTCTTAAAAACA
GGAAATAGCCACTATGCCTCCAGAAAACCCTTCCCATCAATTTTTAGTGGTGCTCTCTTCAGTAAGAAAGCATAA

Upstream 100 bases:

>100_bases
TTTTTAGTTCTATCAACCACTGGACAAAAGTGTGTTTTTTAGTAACCATTCAGATCAAAATAATTCCTTTATTCTTAATA
ATAAATTATGAGGATTTCCT

Downstream 100 bases:

>100_bases
AAATTAAAATAAGGTGTTTAACAAAATTTTTGCAATTTTTAAGTGCAATTGAGTGGAATTAATGACAACGTTAGCCTAAT
ATTGAAACATAGACGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNLIKIKSKTLFMVLVYSLLSPAYAASHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKMDNRIVKEAKIHSMDMAKHAI
PFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVKNWLRSPGHKRNIVGNYDLTGIGIARDEKGKIYFTQIFLKT
GNSHYASRKPFPSIFSGALFSKKA

Sequences:

>Translated_184_residues
MNLIKIKSKTLFMVLVYSLLSPAYAASHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKMDNRIVKEAKIHSMDMAKHAI
PFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVKNWLRSPGHKRNIVGNYDLTGIGIARDEKGKIYFTQIFLKT
GNSHYASRKPFPSIFSGALFSKKA
>Mature_184_residues
MNLIKIKSKTLFMVLVYSLLSPAYAASHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKMDNRIVKEAKIHSMDMAKHAI
PFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVKNWLRSPGHKRNIVGNYDLTGIGIARDEKGKIYFTQIFLKT
GNSHYASRKPFPSIFSGALFSKKA

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 20883; Mature: 20883

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKIKSKTLFMVLVYSLLSPAYAASHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKM
CCEEEECCHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHCCEEEEEECHHHHHCCCCCCC
DNRIVKEAKIHSMDMAKHAIPFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVK
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHH
NWLRSPGHKRNIVGNYDLTGIGIARDEKGKIYFTQIFLKTGNSHYASRKPFPSIFSGALF
HHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
SKKA
CCCC
>Mature Secondary Structure
MNLIKIKSKTLFMVLVYSLLSPAYAASHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKM
CCEEEECCHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHCCEEEEEECHHHHHCCCCCCC
DNRIVKEAKIHSMDMAKHAIPFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVK
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHH
NWLRSPGHKRNIVGNYDLTGIGIARDEKGKIYFTQIFLKTGNSHYASRKPFPSIFSGALF
HHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
SKKA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]