Click here to switch to the map view.

The map label for this gene is 54293770

Identifier: 54293770

GI number: 54293770

Start: 935149

End: 936315

Strand: Direct

Name: 54293770

Synonym: lpl0826

Alternate gene names: NA

Gene position: 935149-936315 (Clockwise)

Preceding gene: 54293769

Following gene: 54293771

Centisome position: 27.95

GC content: 33.76

Gene sequence:

>1167_bases
ATGTCTGATACACATTGCGAAAAAAGCTACAGATCAAAACTTCTCAAACAGGGTTTGCTTGGTGTATTCATCTTATGCCT
GGTTTTTCTGTTTCTCGAATCTTTCTCAAGATGGATAGCAGCTACAAGTACAGCACCTTTTGGTGAAAGTATCAGGAATG
ATCAGAAAATGATTGTGAGTGACTCCATCAGGCAAGGTATTGTTGCTATAGGGGATTCCATTATTGCCAGAAGCTTTTAT
CCGGAACTTTTTTCTTCTTTATTAGCTAAAAATTTTTCAAAGCCTTATGAGGTGTATAACATAGGAGTAGAAGGTTCAGG
AATTATCCATCATCGGGCACACTTAAGATATTTATTGAAAAGGAATGTCAAACTAGATTTTGTGATTATGAATGTTTCTG
TCCATAATCTTAATTTGAATTATTTTGCCCATGATAGTAATGAACATATCATAGAGCAGAGATATCAAGATCATAACTCC
TTGGATTATTATAACCGTTGTTTTACAGTAAATGAGCGAACACTTTCATCAACACTTTATTGCAAGATAGCGAAATATTC
TTATTTTTTTCGTTTAGTACATTATTACCATCAACAGATTAACAATAGTTTGCAATCTTTGTTGCATACACAAAGATTGA
GAACTGAGAACTTGATAATCAAATATCCAGCAATCTCTAGACAAGGTTTTTCACCAATTTTTGGCAGTCTTGCTGAGGAT
ACAATAAGCACGCCTAGAATGTTTGAATTTTTGAGACATGAATATAGGAGTGCATTTGCAAATTTTAAGTTAACTACTGA
AGTTTTAGACAGTATTATTGATGATCTGAATAACAATTCAATTAAAGTGATCTTGGTCTTGGCGCCAGTTTACCATCCAG
TAACTCGTAAGGTTTATGACGAATTCAACTTGCCATCTAATGGCGCTATAGTCAGTACGCTTGAAAATTATGCTTTAAAG
AAAAATATTGCTTTTATAAACTTATTCGAGGAATGTCAGGATCCTGTTTATTTCCAGGATCCAGTACATCCTAATATCTA
TGGTGCTGTAAAGATAACTACATTGTTATCGCAAAAAATTATCAACAAGCAATTTGTAGGGCCTGACGGGTATTTGGATA
AGGAATTGTTTCAATACCTAAAAAGCAATAATGAGAACAAAGCATGA

Upstream 100 bases:

>100_bases
TTATTTCTTCAGTTTTTTATAGCTTTTAATACTATACATCATTATCAAATATGTTTATTCTGCGCAAATTCGAATATTAT
AAAATTAATTTCTGTTATTT

Downstream 100 bases:

>100_bases
ATTTTGTCACTTTTCAGTTCGTTGTTTTTTTAGTTATTACAGTCATTGTCTTTATGATGATGTCTCCCCATTATCGGAAA
TATTTTATTTTGCTTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSDTHCEKSYRSKLLKQGLLGVFILCLVFLFLESFSRWIAATSTAPFGESIRNDQKMIVSDSIRQGIVAIGDSIIARSFY
PELFSSLLAKNFSKPYEVYNIGVEGSGIIHHRAHLRYLLKRNVKLDFVIMNVSVHNLNLNYFAHDSNEHIIEQRYQDHNS
LDYYNRCFTVNERTLSSTLYCKIAKYSYFFRLVHYYHQQINNSLQSLLHTQRLRTENLIIKYPAISRQGFSPIFGSLAED
TISTPRMFEFLRHEYRSAFANFKLTTEVLDSIIDDLNNNSIKVILVLAPVYHPVTRKVYDEFNLPSNGAIVSTLENYALK
KNIAFINLFEECQDPVYFQDPVHPNIYGAVKITTLLSQKIINKQFVGPDGYLDKELFQYLKSNNENKA

Sequences:

>Translated_388_residues
MSDTHCEKSYRSKLLKQGLLGVFILCLVFLFLESFSRWIAATSTAPFGESIRNDQKMIVSDSIRQGIVAIGDSIIARSFY
PELFSSLLAKNFSKPYEVYNIGVEGSGIIHHRAHLRYLLKRNVKLDFVIMNVSVHNLNLNYFAHDSNEHIIEQRYQDHNS
LDYYNRCFTVNERTLSSTLYCKIAKYSYFFRLVHYYHQQINNSLQSLLHTQRLRTENLIIKYPAISRQGFSPIFGSLAED
TISTPRMFEFLRHEYRSAFANFKLTTEVLDSIIDDLNNNSIKVILVLAPVYHPVTRKVYDEFNLPSNGAIVSTLENYALK
KNIAFINLFEECQDPVYFQDPVHPNIYGAVKITTLLSQKIINKQFVGPDGYLDKELFQYLKSNNENKA
>Mature_387_residues
SDTHCEKSYRSKLLKQGLLGVFILCLVFLFLESFSRWIAATSTAPFGESIRNDQKMIVSDSIRQGIVAIGDSIIARSFYP
ELFSSLLAKNFSKPYEVYNIGVEGSGIIHHRAHLRYLLKRNVKLDFVIMNVSVHNLNLNYFAHDSNEHIIEQRYQDHNSL
DYYNRCFTVNERTLSSTLYCKIAKYSYFFRLVHYYHQQINNSLQSLLHTQRLRTENLIIKYPAISRQGFSPIFGSLAEDT
ISTPRMFEFLRHEYRSAFANFKLTTEVLDSIIDDLNNNSIKVILVLAPVYHPVTRKVYDEFNLPSNGAIVSTLENYALKK
NIAFINLFEECQDPVYFQDPVHPNIYGAVKITTLLSQKIINKQFVGPDGYLDKELFQYLKSNNENKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44912; Mature: 44781

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTHCEKSYRSKLLKQGLLGVFILCLVFLFLESFSRWIAATSTAPFGESIRNDQKMIVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHH
DSIRQGIVAIGDSIIARSFYPELFSSLLAKNFSKPYEVYNIGVEGSGIIHHRAHLRYLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEHHHHHHHHHHH
RNVKLDFVIMNVSVHNLNLNYFAHDSNEHIIEQRYQDHNSLDYYNRCFTVNERTLSSTLY
CCCEEEEEEEEEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHEEEECCHHHHHHHH
CKIAKYSYFFRLVHYYHQQINNSLQSLLHTQRLRTENLIIKYPAISRQGFSPIFGSLAED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
TISTPRMFEFLRHEYRSAFANFKLTTEVLDSIIDDLNNNSIKVILVLAPVYHPVTRKVYD
HCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHH
EFNLPSNGAIVSTLENYALKKNIAFINLFEECQDPVYFQDPVHPNIYGAVKITTLLSQKI
HCCCCCCCHHHHHHHHHHHHHCHHEEEHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHH
INKQFVGPDGYLDKELFQYLKSNNENKA
HHHHCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDTHCEKSYRSKLLKQGLLGVFILCLVFLFLESFSRWIAATSTAPFGESIRNDQKMIVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHH
DSIRQGIVAIGDSIIARSFYPELFSSLLAKNFSKPYEVYNIGVEGSGIIHHRAHLRYLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEHHHHHHHHHHH
RNVKLDFVIMNVSVHNLNLNYFAHDSNEHIIEQRYQDHNSLDYYNRCFTVNERTLSSTLY
CCCEEEEEEEEEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHEEEECCHHHHHHHH
CKIAKYSYFFRLVHYYHQQINNSLQSLLHTQRLRTENLIIKYPAISRQGFSPIFGSLAED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
TISTPRMFEFLRHEYRSAFANFKLTTEVLDSIIDDLNNNSIKVILVLAPVYHPVTRKVYD
HCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHH
EFNLPSNGAIVSTLENYALKKNIAFINLFEECQDPVYFQDPVHPNIYGAVKITTLLSQKI
HCCCCCCCHHHHHHHHHHHHHCHHEEEHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHH
INKQFVGPDGYLDKELFQYLKSNNENKA
HHHHCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA