Click here to switch to the map view.

The map label for this gene is 54293544

Identifier: 54293544

GI number: 54293544

Start: 644825

End: 645706

Strand: Reverse

Name: 54293544

Synonym: lpl0596

Alternate gene names: NA

Gene position: 645706-644825 (Counterclockwise)

Preceding gene: 54293545

Following gene: 54293543

Centisome position: 19.3

GC content: 44.56

Gene sequence:

>882_bases
ATGCAGCCATTCATTATCGACGAAAAACTGGTTTGTCGTTTAATTGCGAGCCAGTTCCCCCATTATTCCAATCTCCCTGT
TAAGCCGGTAGCTGTCGGCGGATGGGATAACCGGACGTTTCATCTTGGCAAAGATATGCTTGTACGACTGCCCAGTGCCG
AGCAATATGAATTGCAGGTTGAAAAAGAGCAACAATGGCTCCCCCAATTGGCTTCCTTGCTACCTGTTCCAATTCCGACA
CCTTTGGCAAAGGGAATGCCTGGCGAAGGATACCCATGGAAATGGTCGATTTACCGTTGGCTTGAAGGAGAAACGATTGT
CTCTGCCAATTTATCTAACCTGAATGAAATCGCAAAAGATCTGGCAACGTTCCTCACCGCTTTTCATCAAATTGATTCTT
CCGGTGGCCCCAAACCTGGGATGCACAGCTTTTATCGCGGTGGAGATTTGAAAATTTATGATCCAGAAACCCGTCAAGCT
ATCGATTGTTTAAAAGGAAAAATTGATACAGACCATGCCACTGAAATTTGGGAAACCGCTCTGAATACCTCTTGGCAAGG
CACACCTGTGTGGGTTCATGGTGATATCAGCGCAGGTAATCTTCTGGTTAAAAATGGGAAATTATGCGCTGTTATCGATT
TTGGGCAGTTGTCCGTTGGTGATCCGGCGTGTGATCTTGCTATTACCTGGACATTATTTGCAGGAGACAGCAGAAAAATC
TTCCTTGAAATGCTTGCTTTAGACAAAGACACTTGGTTCCGTGGGCAAGCATGGGCTTTATGGAAAGCGTTAATCGTAGC
AGCAGGCATTGTAAACACCAATGCAATGGAAGTGCAAAAATCCTGCCGTATTATTAATGAGCTATTTTTAACTGAGTTAT
AA

Upstream 100 bases:

>100_bases
ATGCACGCAATCTAGTTTTCATAACATAAACAAATAGATAGGATAAATTTAAAAATAATCTTATTATTCCTGCATCATAA
CACTTGGAAATATTATTTTG

Downstream 100 bases:

>100_bases
TCTATACCATATCACTCAATTTGATTCAGAGAATACTATTTCCTTGTAGGCAGTGATATGCTATAAAATAATCTCCGGAC
GAGACGCGCCGTACCCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphotransferase; GNAT Family Acetyltransferase; Acetyltransferase; Aminoglycoside 3-Phosphotransferase; Aminoglycoside Phosphotransferase Family Protein; Transferase; Acetyltransferase GNAT Family Protein; LOW QUALITY PROTEIN Phosphotransferase; Aminoglycoside Phosphotransferase-Like Protein; Phosphotransferase Family; Phosphotransferase Family Protein

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQPFIIDEKLVCRLIASQFPHYSNLPVKPVAVGGWDNRTFHLGKDMLVRLPSAEQYELQVEKEQQWLPQLASLLPVPIPT
PLAKGMPGEGYPWKWSIYRWLEGETIVSANLSNLNEIAKDLATFLTAFHQIDSSGGPKPGMHSFYRGGDLKIYDPETRQA
IDCLKGKIDTDHATEIWETALNTSWQGTPVWVHGDISAGNLLVKNGKLCAVIDFGQLSVGDPACDLAITWTLFAGDSRKI
FLEMLALDKDTWFRGQAWALWKALIVAAGIVNTNAMEVQKSCRIINELFLTEL

Sequences:

>Translated_293_residues
MQPFIIDEKLVCRLIASQFPHYSNLPVKPVAVGGWDNRTFHLGKDMLVRLPSAEQYELQVEKEQQWLPQLASLLPVPIPT
PLAKGMPGEGYPWKWSIYRWLEGETIVSANLSNLNEIAKDLATFLTAFHQIDSSGGPKPGMHSFYRGGDLKIYDPETRQA
IDCLKGKIDTDHATEIWETALNTSWQGTPVWVHGDISAGNLLVKNGKLCAVIDFGQLSVGDPACDLAITWTLFAGDSRKI
FLEMLALDKDTWFRGQAWALWKALIVAAGIVNTNAMEVQKSCRIINELFLTEL
>Mature_293_residues
MQPFIIDEKLVCRLIASQFPHYSNLPVKPVAVGGWDNRTFHLGKDMLVRLPSAEQYELQVEKEQQWLPQLASLLPVPIPT
PLAKGMPGEGYPWKWSIYRWLEGETIVSANLSNLNEIAKDLATFLTAFHQIDSSGGPKPGMHSFYRGGDLKIYDPETRQA
IDCLKGKIDTDHATEIWETALNTSWQGTPVWVHGDISAGNLLVKNGKLCAVIDFGQLSVGDPACDLAITWTLFAGDSRKI
FLEMLALDKDTWFRGQAWALWKALIVAAGIVNTNAMEVQKSCRIINELFLTEL

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32737; Mature: 32737

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFIIDEKLVCRLIASQFPHYSNLPVKPVAVGGWDNRTFHLGKDMLVRLPSAEQYELQV
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCHHEEECCCCCCEEEEE
EKEQQWLPQLASLLPVPIPTPLAKGMPGEGYPWKWSIYRWLEGETIVSANLSNLNEIAKD
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCEEEECCHHHHHHHHHH
LATFLTAFHQIDSSGGPKPGMHSFYRGGDLKIYDPETRQAIDCLKGKIDTDHATEIWETA
HHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHH
LNTSWQGTPVWVHGDISAGNLLVKNGKLCAVIDFGQLSVGDPACDLAITWTLFAGDSRKI
HCCCCCCCEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHH
FLEMLALDKDTWFRGQAWALWKALIVAAGIVNTNAMEVQKSCRIINELFLTEL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPFIIDEKLVCRLIASQFPHYSNLPVKPVAVGGWDNRTFHLGKDMLVRLPSAEQYELQV
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCHHEEECCCCCCEEEEE
EKEQQWLPQLASLLPVPIPTPLAKGMPGEGYPWKWSIYRWLEGETIVSANLSNLNEIAKD
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCEEEECCHHHHHHHHHH
LATFLTAFHQIDSSGGPKPGMHSFYRGGDLKIYDPETRQAIDCLKGKIDTDHATEIWETA
HHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHH
LNTSWQGTPVWVHGDISAGNLLVKNGKLCAVIDFGQLSVGDPACDLAITWTLFAGDSRKI
HCCCCCCCEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHH
FLEMLALDKDTWFRGQAWALWKALIVAAGIVNTNAMEVQKSCRIINELFLTEL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA