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The map label for this gene is yfnA [H]

Identifier: 54293285

GI number: 54293285

Start: 383791

End: 384975

Strand: Reverse

Name: yfnA [H]

Synonym: lpl0333

Alternate gene names: 54293285

Gene position: 384975-383791 (Counterclockwise)

Preceding gene: 54293286

Following gene: 54293284

Centisome position: 11.51

GC content: 39.16

Gene sequence:

>1185_bases
ATGCACTTAAAACGGACTTTATCATTAACACTACTGGCCTTTTATGGACTTGGAACCATATTAGGCGCGGGAATTTATGC
CCTTGTTGGTGAAGTTGCAAAGGAGGCAGCACAATTTACCCCTCTATCCTTCTTAATCGCCTCCATCATCGCTTTTTTTA
CTGCCATTTCTTATGCGGAACTAAGCTCCAGATTACCGCTTAGTGCAGGCTCCGCTCTTTACGTGCGGAGAGCATTCCAG
CAAAGGTGGCTATCTGGCTTAATCGGTTGGATAGTGGTTTTAACAGGTGTGATCTCGGCAGCCACCCTATCCCATGGCTT
TGTCAAATATTTTCAATTGTTTTTACCCTTACCGCCTTCCCTTATCATCACTATTTTAGTTGTCATTTTAGCGGGAGTTG
CTGTTTGGGGTATTCGTGAATCAGCGACTCTTATCCTGTTCATGACACTTATGGAAGTGGGTGGATTATTGATGATTATT
TATTACGGTCGTTATTCATTAGCTTCTATCGACATCCAATCTTTCTCTTTTCCTCATTCTTTTGATGGGGTGCTTATCGG
AGCTTTTATTGCGTTTTATGCTTTTATTGGTTTTGAAGATATGGTGAATACCGCCGAGGAAACAATAAATCCTGAAAAAA
CTCTTCCAAAAGCTATTTTTCTTGCTTTAATATCCGCAACCATTTTATATGTTGTGGTCGCTTGGGTTATCGTCTCGACC
ATACCATCCCATACTTTAGTCAAAACGGACATGCCCCTTATTGAAATTATTAAGCTTCAGGGGCAATCCCCCTTGTTGTT
TTCAATCATTGCGCTAATTTCTATTACCAATGGAATTCTGGTGCAAATTATTATGGCTTCGCGACTTATTTATGGTATGG
CTAATCAACAAAATGCCCCTCAAATATTCTCCTTTGTTTATTCCAAAACGCAAACACCAGCCAACTCGACCTTACTGGTG
TCTCTTATTATTTTACTATTTGCCTATGCCCTCCCTATTACAACCCTGGCTAAATTAACCAGCAGCATCATATTGTGTAT
TTTTATCATCATTCATGCCTCATTAATTAAAATCAAACTGACAGAAAAAAAATCACCAGAGGCTATTTCATTCCCTATTG
TTTTCCCGATGATTTCCATTTTATTAACCCTGACATTTTTAGGCATACAGTTTTTTTTAAAGTAG

Upstream 100 bases:

>100_bases
TTCACTATCTATTTAGTAACCGGCGAAAAATAAAAAAGTAAGCAAACAAAAAAGAAGACTAGTTCTACGACTATAGATCT
CCAGATAAAATGGGGGAGTA

Downstream 100 bases:

>100_bases
ATTATCTCTTCTAAATCTTTAAACCAGTGCCGCATAAATTTTGGGAATCGACAGAGTCATTGCCTGTTTTCAATTCACTG
CCCCTCTTTGCCTGATGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MHLKRTLSLTLLAFYGLGTILGAGIYALVGEVAKEAAQFTPLSFLIASIIAFFTAISYAELSSRLPLSAGSALYVRRAFQ
QRWLSGLIGWIVVLTGVISAATLSHGFVKYFQLFLPLPPSLIITILVVILAGVAVWGIRESATLILFMTLMEVGGLLMII
YYGRYSLASIDIQSFSFPHSFDGVLIGAFIAFYAFIGFEDMVNTAEETINPEKTLPKAIFLALISATILYVVVAWVIVST
IPSHTLVKTDMPLIEIIKLQGQSPLLFSIIALISITNGILVQIIMASRLIYGMANQQNAPQIFSFVYSKTQTPANSTLLV
SLIILLFAYALPITTLAKLTSSIILCIFIIIHASLIKIKLTEKKSPEAISFPIVFPMISILLTLTFLGIQFFLK

Sequences:

>Translated_394_residues
MHLKRTLSLTLLAFYGLGTILGAGIYALVGEVAKEAAQFTPLSFLIASIIAFFTAISYAELSSRLPLSAGSALYVRRAFQ
QRWLSGLIGWIVVLTGVISAATLSHGFVKYFQLFLPLPPSLIITILVVILAGVAVWGIRESATLILFMTLMEVGGLLMII
YYGRYSLASIDIQSFSFPHSFDGVLIGAFIAFYAFIGFEDMVNTAEETINPEKTLPKAIFLALISATILYVVVAWVIVST
IPSHTLVKTDMPLIEIIKLQGQSPLLFSIIALISITNGILVQIIMASRLIYGMANQQNAPQIFSFVYSKTQTPANSTLLV
SLIILLFAYALPITTLAKLTSSIILCIFIIIHASLIKIKLTEKKSPEAISFPIVFPMISILLTLTFLGIQFFLK
>Mature_394_residues
MHLKRTLSLTLLAFYGLGTILGAGIYALVGEVAKEAAQFTPLSFLIASIIAFFTAISYAELSSRLPLSAGSALYVRRAFQ
QRWLSGLIGWIVVLTGVISAATLSHGFVKYFQLFLPLPPSLIITILVVILAGVAVWGIRESATLILFMTLMEVGGLLMII
YYGRYSLASIDIQSFSFPHSFDGVLIGAFIAFYAFIGFEDMVNTAEETINPEKTLPKAIFLALISATILYVVVAWVIVST
IPSHTLVKTDMPLIEIIKLQGQSPLLFSIIALISITNGILVQIIMASRLIYGMANQQNAPQIFSFVYSKTQTPANSTLLV
SLIILLFAYALPITTLAKLTSSIILCIFIIIHASLIKIKLTEKKSPEAISFPIVFPMISILLTLTFLGIQFFLK

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI258614005, Length=422, Percent_Identity=25.3554502369668, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI258614003, Length=422, Percent_Identity=25.3554502369668, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4507047, Length=412, Percent_Identity=24.2718446601942, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI258645169, Length=424, Percent_Identity=25, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI110347453, Length=345, Percent_Identity=29.2753623188406, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI181337167, Length=324, Percent_Identity=26.2345679012346, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI114326544, Length=209, Percent_Identity=26.3157894736842, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI114326550, Length=209, Percent_Identity=26.3157894736842, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI7657683, Length=288, Percent_Identity=26.0416666666667, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1786694, Length=362, Percent_Identity=25.6906077348066, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786302, Length=400, Percent_Identity=23.75, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87082250, Length=354, Percent_Identity=25.4237288135593, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082023, Length=348, Percent_Identity=26.7241379310345, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790653, Length=342, Percent_Identity=24.8538011695906, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786789, Length=415, Percent_Identity=23.855421686747, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081869, Length=337, Percent_Identity=22.2551928783383, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789017, Length=385, Percent_Identity=21.8181818181818, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786602, Length=395, Percent_Identity=24.0506329113924, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17531343, Length=362, Percent_Identity=27.9005524861878, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17533459, Length=393, Percent_Identity=26.4631043256997, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17532491, Length=391, Percent_Identity=25.5754475703325, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI32566699, Length=314, Percent_Identity=26.1146496815287, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17540018, Length=408, Percent_Identity=23.7745098039216, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17568033, Length=405, Percent_Identity=24.4444444444444, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24667468, Length=389, Percent_Identity=25.1928020565553, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24666159, Length=401, Percent_Identity=23.1920199501247, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI221512776, Length=401, Percent_Identity=23.1920199501247, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24668806, Length=413, Percent_Identity=26.1501210653753, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21356285, Length=413, Percent_Identity=26.1501210653753, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24668802, Length=413, Percent_Identity=26.1501210653753, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI161077963, Length=363, Percent_Identity=26.4462809917355, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281366235, Length=399, Percent_Identity=25.062656641604, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007820, Length=399, Percent_Identity=25.062656641604, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007818, Length=275, Percent_Identity=28.7272727272727, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI85725152, Length=275, Percent_Identity=28.7272727272727, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI45550968, Length=354, Percent_Identity=26.5536723163842, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI19921172, Length=354, Percent_Identity=26.5536723163842, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 43085; Mature: 43085

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLKRTLSLTLLAFYGLGTILGAGIYALVGEVAKEAAQFTPLSFLIASIIAFFTAISYAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSSRLPLSAGSALYVRRAFQQRWLSGLIGWIVVLTGVISAATLSHGFVKYFQLFLPLPPS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LIITILVVILAGVAVWGIRESATLILFMTLMEVGGLLMIIYYGRYSLASIDIQSFSFPHS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEHHHCCCCCC
FDGVLIGAFIAFYAFIGFEDMVNTAEETINPEKTLPKAIFLALISATILYVVVAWVIVST
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPSHTLVKTDMPLIEIIKLQGQSPLLFSIIALISITNGILVQIIMASRLIYGMANQQNAP
CCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QIFSFVYSKTQTPANSTLLVSLIILLFAYALPITTLAKLTSSIILCIFIIIHASLIKIKL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TEKKSPEAISFPIVFPMISILLTLTFLGIQFFLK
ECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHLKRTLSLTLLAFYGLGTILGAGIYALVGEVAKEAAQFTPLSFLIASIIAFFTAISYAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSSRLPLSAGSALYVRRAFQQRWLSGLIGWIVVLTGVISAATLSHGFVKYFQLFLPLPPS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LIITILVVILAGVAVWGIRESATLILFMTLMEVGGLLMIIYYGRYSLASIDIQSFSFPHS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEHHHCCCCCC
FDGVLIGAFIAFYAFIGFEDMVNTAEETINPEKTLPKAIFLALISATILYVVVAWVIVST
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPSHTLVKTDMPLIEIIKLQGQSPLLFSIIALISITNGILVQIIMASRLIYGMANQQNAP
CCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QIFSFVYSKTQTPANSTLLVSLIILLFAYALPITTLAKLTSSIILCIFIIIHASLIKIKL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TEKKSPEAISFPIVFPMISILLTLTFLGIQFFLK
ECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]