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The map label for this gene is yxaC [H]

Identifier: 54293219

GI number: 54293219

Start: 299475

End: 300182

Strand: Reverse

Name: yxaC [H]

Synonym: lpl0267

Alternate gene names: 54293219

Gene position: 300182-299475 (Counterclockwise)

Preceding gene: 54293220

Following gene: 54293218

Centisome position: 8.97

GC content: 45.48

Gene sequence:

>708_bases
ATGCCAAGCAGCATTCTCTCTGAATCCATGATCCAGGCATTTTTCTGGTCGCTTATCACAATAGGCATGTATTTTATTAC
CCAAAAACTATATAGAAGATGGCCTTTTTGGTGGCTAATGCCGCTTGCTTTAACACCAATACTGGTTGCCAGCGTAGTGC
TTTTACTGCATGTAAACTACCAGGACTATTTCCGCGGAACAAAATGGCTAGTCTTGTTAATCGGTCCTGCAACCGTAGCC
TTTGCCATTCCCATTTATGAAAAACGTGCCCTCATTCGCCAGCATTGGCCAGTACTTTTAATTGGCGTGATTGTGGGAAG
TTTCACTGCCATAGTATCCAGTTGGGGATTAGCAATCCTTCTTGGCCTTGATGATAATTTACGTCTAAGTCTGCTCCCTC
GCTCTATCAGCACACCGTTCGCTATAGAAATCTCGCGGGGAATTGGTGCAGCGCCTGATTTGACTGCGATTTTTGTTATT
GTCACAGGGATATTGGGAGCTATACTCGGTGAGTTCATCCTGTCGCGCTTGCCTTTTAACTCAGCTCTTGCCAGAGGTGC
CCTTTTAGGAGTAGGAGCCCATGCGGCAGGAACCGCTCAGGCCCATAAAATAGGGAATACTGAAGGCGCCATTGCCAGTT
TGGCTATGATTTTAGTAGGACTCTTCAATATACTTCTTCTCCCCCTTATCAGCCATCTTTTGAAATAA

Upstream 100 bases:

>100_bases
TTAGGCCTTAAAATTCTCTTTATTATTCTGCTCAGCACAATCACGGTGATGCTAGTCACTGCCCTTGTTGTAGATTATTG
CTACCGTTGGAGAACGCATC

Downstream 100 bases:

>100_bases
AAGGGCGTTTAGTAGAAATTAAAAGGAACTCCTCTAGTTAAGAAAAAATAATAAGCATGTTATTTTATGGTTTTTCCATC
AATAGAAGAAAAGAATGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MPSSILSESMIQAFFWSLITIGMYFITQKLYRRWPFWWLMPLALTPILVASVVLLLHVNYQDYFRGTKWLVLLIGPATVA
FAIPIYEKRALIRQHWPVLLIGVIVGSFTAIVSSWGLAILLGLDDNLRLSLLPRSISTPFAIEISRGIGAAPDLTAIFVI
VTGILGAILGEFILSRLPFNSALARGALLGVGAHAAGTAQAHKIGNTEGAIASLAMILVGLFNILLLPLISHLLK

Sequences:

>Translated_235_residues
MPSSILSESMIQAFFWSLITIGMYFITQKLYRRWPFWWLMPLALTPILVASVVLLLHVNYQDYFRGTKWLVLLIGPATVA
FAIPIYEKRALIRQHWPVLLIGVIVGSFTAIVSSWGLAILLGLDDNLRLSLLPRSISTPFAIEISRGIGAAPDLTAIFVI
VTGILGAILGEFILSRLPFNSALARGALLGVGAHAAGTAQAHKIGNTEGAIASLAMILVGLFNILLLPLISHLLK
>Mature_234_residues
PSSILSESMIQAFFWSLITIGMYFITQKLYRRWPFWWLMPLALTPILVASVVLLLHVNYQDYFRGTKWLVLLIGPATVAF
AIPIYEKRALIRQHWPVLLIGVIVGSFTAIVSSWGLAILLGLDDNLRLSLLPRSISTPFAIEISRGIGAAPDLTAIFVIV
TGILGAILGEFILSRLPFNSALARGALLGVGAHAAGTAQAHKIGNTEGAIASLAMILVGLFNILLLPLISHLLK

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=222, Percent_Identity=34.6846846846847, Blast_Score=143, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25580; Mature: 25449

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSILSESMIQAFFWSLITIGMYFITQKLYRRWPFWWLMPLALTPILVASVVLLLHVNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
QDYFRGTKWLVLLIGPATVAFAIPIYEKRALIRQHWPVLLIGVIVGSFTAIVSSWGLAIL
HHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE
LGLDDNLRLSLLPRSISTPFAIEISRGIGAAPDLTAIFVIVTGILGAILGEFILSRLPFN
EECCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SALARGALLGVGAHAAGTAQAHKIGNTEGAIASLAMILVGLFNILLLPLISHLLK
HHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSSILSESMIQAFFWSLITIGMYFITQKLYRRWPFWWLMPLALTPILVASVVLLLHVNY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
QDYFRGTKWLVLLIGPATVAFAIPIYEKRALIRQHWPVLLIGVIVGSFTAIVSSWGLAIL
HHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE
LGLDDNLRLSLLPRSISTPFAIEISRGIGAAPDLTAIFVIVTGILGAILGEFILSRLPFN
EECCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SALARGALLGVGAHAAGTAQAHKIGNTEGAIASLAMILVGLFNILLLPLISHLLK
HHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]