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The map label for this gene is 54293217

Identifier: 54293217

GI number: 54293217

Start: 297459

End: 297932

Strand: Reverse

Name: 54293217

Synonym: lpl0265

Alternate gene names: NA

Gene position: 297932-297459 (Counterclockwise)

Preceding gene: 54293218

Following gene: 54293213

Centisome position: 8.9

GC content: 39.45

Gene sequence:

>474_bases
TTGAATAAAAAAAGTTGGATGGAACTGATCGCTTGGATAATTACCTTTGAAGCAATTGGTTTTTTTTTAGGAATGCTGAC
GCAAGCGAATATTCCCTCTTGGTATTTAGGGCTCAATAAATCTGGTTTAACTCCTCCTGGACCAGTATTTTCAATTGTTT
GGTCGATTTTATATGCCCTTCTTGCAATAGTTGGTTGGGTTTTATGGTGCTCTCGAAATGAGTCTGAGATGAGATCTGTG
TTTTATTTATATTCAGTACAGATGCTGATGAATTGGGCATGGACCCCGCTTTTTTTTGTGCTGCATTGGACTGGGCTTGG
TTTGTTATGGATTCTTGTGATGGCGGGTCTCACTGGGCTTCTGATTTTGAGCCTAAAAAATAAGAAAAAAAGCATCGCTA
TATTGTTACTCCCCTATCTCGTTTGGCTTCTTTTTGCCGCCTATCTCAATGGCGTGATATGGCTTCTCAATTAA

Upstream 100 bases:

>100_bases
TTGATCACCAAGAAGCGAGAACTAAGGCATTGAGTTACTATCAGCAAATAAAAAAAGGAATGGATTGACAAGAGATTAAC
TAAAATTTGGAGAGACCCCA

Downstream 100 bases:

>100_bases
CTGTTCCCAAGTTTTCCCTTAAGCCAAATACAAACTGGCTATAGCGAAATCGTGCTCAATCTTACTTTGCGAGATAAGTA
CAGGACTTCTAAATAACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: TspO/MBR Family Protein; Tryptophan-Rich Sensory Protein; Sensory Protein; CrtK Protein; TspO And MBR Like Proteins; Outer Membrane Protein TspO; DNA Gyrase Inhibitor; Peripheral-Type Benzodiazepine Receptor; Tryptophan-Rich Sensory Protein TSPO-Like Protein; TspO-And MBR-Like Protein; Tryptophan Rich Sensory Protein; Integral Membrane Protein; CrtK/TspO Family Sensor Protein

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNKKSWMELIAWIITFEAIGFFLGMLTQANIPSWYLGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSV
FYLYSVQMLMNWAWTPLFFVLHWTGLGLLWILVMAGLTGLLILSLKNKKKSIAILLLPYLVWLLFAAYLNGVIWLLN

Sequences:

>Translated_157_residues
MNKKSWMELIAWIITFEAIGFFLGMLTQANIPSWYLGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSV
FYLYSVQMLMNWAWTPLFFVLHWTGLGLLWILVMAGLTGLLILSLKNKKKSIAILLLPYLVWLLFAAYLNGVIWLLN
>Mature_157_residues
MNKKSWMELIAWIITFEAIGFFLGMLTQANIPSWYLGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSV
FYLYSVQMLMNWAWTPLFFVLHWTGLGLLWILVMAGLTGLLILSLKNKKKSIAILLLPYLVWLLFAAYLNGVIWLLN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI74275350, Length=144, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19920472, Length=141, Percent_Identity=31.9148936170213, Blast_Score=76, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18032; Mature: 18032

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKSWMELIAWIITFEAIGFFLGMLTQANIPSWYLGLNKSGLTPPGPVFSIVWSILYAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCHHHHHHHHHHHHH
LAIVGWVLWCSRNESEMRSVFYLYSVQMLMNWAWTPLFFVLHWTGLGLLWILVMAGLTGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSLKNKKKSIAILLLPYLVWLLFAAYLNGVIWLLN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MNKKSWMELIAWIITFEAIGFFLGMLTQANIPSWYLGLNKSGLTPPGPVFSIVWSILYAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCHHHHHHHHHHHHH
LAIVGWVLWCSRNESEMRSVFYLYSVQMLMNWAWTPLFFVLHWTGLGLLWILVMAGLTGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSLKNKKKSIAILLLPYLVWLLFAAYLNGVIWLLN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA