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The map label for this gene is 54293213

Identifier: 54293213

GI number: 54293213

Start: 290994

End: 291407

Strand: Reverse

Name: 54293213

Synonym: lpl0261

Alternate gene names: NA

Gene position: 291407-290994 (Counterclockwise)

Preceding gene: 54293217

Following gene: 54293210

Centisome position: 8.71

GC content: 39.86

Gene sequence:

>414_bases
ATGAATGGATGGACGCTTAAGGTATTTGCAATTGCCTTTTTAATCTTTATTGTGACAGATATGATATGGCTGGGGTTCAT
CGCCAGAAATCTTTATTTTGACCAATACCAACAGTGGCTGCGTCTTTCAGAGGGGCAATTAAAGCCAATATGGTGGTCTG
CTTTATTAGTTTATCTGCTTTTTGCCCTGAGTATTGTTGTCTTTGTTATACCGCTGGCTAAAACATCGCTACCTTATGCC
GCATTATATGGCGCGCTTCTTGGTGCTATTATTTATGGAATTTATGATTTTACCTGCCTCGCTATTTTTAAGGATTTTCC
TGTCGGCATGGCATTCCTTGATTGGCTATGGGGTATAGTACTATGCTCCTGGAGTTCGATAGCGACAATCTATGTGGCAA
GTTATATCAAATAA

Upstream 100 bases:

>100_bases
TGTTAAATGATAGATTTTGGAAATGAAGTTCTATTACCTGAATCCGATTGAATGTAAAATACAAAACCAGAAGGATAAAA
ATCATCATTAAGGGAATAAA

Downstream 100 bases:

>100_bases
GACATCAGAGATTGGCAGAGTCCAAGTCTGCCAATATTCGCTGTGCTTTATGGATAGTCTTCTTTTGTTTATCAAAATCC
ATTTTTTGCCAATTCATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNGWTLKVFAIAFLIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLLFALSIVVFVIPLAKTSLPYA
ALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIVLCSWSSIATIYVASYIK

Sequences:

>Translated_137_residues
MNGWTLKVFAIAFLIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLLFALSIVVFVIPLAKTSLPYA
ALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIVLCSWSSIATIYVASYIK
>Mature_137_residues
MNGWTLKVFAIAFLIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLLFALSIVVFVIPLAKTSLPYA
ALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIVLCSWSSIATIYVASYIK

Specific function: Unknown

COG id: COG4852

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15715; Mature: 15715

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGWTLKVFAIAFLIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FALSIVVFVIPLAKTSLPYAALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCSWSSIATIYVASYIK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGWTLKVFAIAFLIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FALSIVVFVIPLAKTSLPYAALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCSWSSIATIYVASYIK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA