Click here to switch to the map view.

The map label for this gene is 54292980

Identifier: 54292980

GI number: 54292980

Start: 20211

End: 21143

Strand: Direct

Name: 54292980

Synonym: lpl0016

Alternate gene names: NA

Gene position: 20211-21143 (Clockwise)

Preceding gene: 54292979

Following gene: 54292981

Centisome position: 0.6

GC content: 34.73

Gene sequence:

>933_bases
ATGTTTATATCTCAACTAAAAGATAAGCTCGCATCCTACGATAGGTATAAAGAAAATCGTATTAATGGACTAAAAGCAGT
ATTTGTTTTGGAACTGATGATTATATTTTATTTTTTTTCTTCCATTGACAATCCGTATTTCTATTATTTTTATGCCCCAA
TCACATGTTTTACTGTGGAGGCGGTGGGAACAACCCTAAAAGAGAAGTACTTGCTTTTACTCTATACCCTTTTAGGAAGC
ATACTCTCTATATTCTTGTTCGGCATAATTTCTGTATACAACGTGCTTTTTATTTTTTTCGTTTTTTTCTATACCTTGGC
TCTTTATTTCCTCGTGCTTCACCATTTTAAAAAAATGCTTGTTATTGTTCCATTGATGCTAAGTTTGGCGTCCTATTCCC
TGATTTATGGTGTGGAGGCAGATAGCAATTTTTATATCGCTATTAATAATGCTTTATATACCTTGGCAGCCATGGCGGTA
ATCTTCGCTGGATTATTTATTTTTCCCAAAAAGTATTATTTTGATATTTGGGAGCGTGCTTTTCTCGAAGTCATTACCGG
CCTGGAATCTTTATCTGCAAAAATTTGCAAGGGAGAAGTCAAAACTATCGCTATTTTTTCGGGCATTATTGTGATGGAGC
GTTATTCCAAAATGCTGCCAAGAAATATTAAGTGCTACAGTATATTAAAGATAACCATTTTATCTTTTGAGTTAATCTTA
ACCATGTCTTACTTGCTGTCTTTTCAAAAGCAACTGCGTAAGGAATACGTTATTGTTTTACATCATTATCTTGAACGTCT
TTGTCAATCCTGTAAAGCGAGGCAACCACTGATACTCTCAGACCAGGAGCTGCCTGCATTTAAAGAAACGCATGAGTTGG
AAATTTTGTATCAATTAATTTTAAGCTGGAATTACTTATGCGCCGATGGTTAG

Upstream 100 bases:

>100_bases
AATCAAAATGAATGGCTGTTGCTTCCTCAGCGATTTCCATTACAAATCAAGATATTGGATCCCGATCCTGACTACCCTTT
AAATCCTGGCGCCAGTGCTT

Downstream 100 bases:

>100_bases
GGGTACAGGCATTTTCTTATGTTGAGCTGCGCTCTATTCAGATCAGCACGGTCTTTGCGTTTACTATTTTTATCCAGGAA
TGGTTGCGTTATCCGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MFISQLKDKLASYDRYKENRINGLKAVFVLELMIIFYFFSSIDNPYFYYFYAPITCFTVEAVGTTLKEKYLLLLYTLLGS
ILSIFLFGIISVYNVLFIFFVFFYTLALYFLVLHHFKKMLVIVPLMLSLASYSLIYGVEADSNFYIAINNALYTLAAMAV
IFAGLFIFPKKYYFDIWERAFLEVITGLESLSAKICKGEVKTIAIFSGIIVMERYSKMLPRNIKCYSILKITILSFELIL
TMSYLLSFQKQLRKEYVIVLHHYLERLCQSCKARQPLILSDQELPAFKETHELEILYQLILSWNYLCADG

Sequences:

>Translated_310_residues
MFISQLKDKLASYDRYKENRINGLKAVFVLELMIIFYFFSSIDNPYFYYFYAPITCFTVEAVGTTLKEKYLLLLYTLLGS
ILSIFLFGIISVYNVLFIFFVFFYTLALYFLVLHHFKKMLVIVPLMLSLASYSLIYGVEADSNFYIAINNALYTLAAMAV
IFAGLFIFPKKYYFDIWERAFLEVITGLESLSAKICKGEVKTIAIFSGIIVMERYSKMLPRNIKCYSILKITILSFELIL
TMSYLLSFQKQLRKEYVIVLHHYLERLCQSCKARQPLILSDQELPAFKETHELEILYQLILSWNYLCADG
>Mature_310_residues
MFISQLKDKLASYDRYKENRINGLKAVFVLELMIIFYFFSSIDNPYFYYFYAPITCFTVEAVGTTLKEKYLLLLYTLLGS
ILSIFLFGIISVYNVLFIFFVFFYTLALYFLVLHHFKKMLVIVPLMLSLASYSLIYGVEADSNFYIAINNALYTLAAMAV
IFAGLFIFPKKYYFDIWERAFLEVITGLESLSAKICKGEVKTIAIFSGIIVMERYSKMLPRNIKCYSILKITILSFELIL
TMSYLLSFQKQLRKEYVIVLHHYLERLCQSCKARQPLILSDQELPAFKETHELEILYQLILSWNYLCADG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36230; Mature: 36230

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISQLKDKLASYDRYKENRINGLKAVFVLELMIIFYFFSSIDNPYFYYFYAPITCFTVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
AVGTTLKEKYLLLLYTLLGSILSIFLFGIISVYNVLFIFFVFFYTLALYFLVLHHFKKML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVPLMLSLASYSLIYGVEADSNFYIAINNALYTLAAMAVIFAGLFIFPKKYYFDIWERA
HHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLEVITGLESLSAKICKGEVKTIAIFSGIIVMERYSKMLPRNIKCYSILKITILSFELIL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TMSYLLSFQKQLRKEYVIVLHHYLERLCQSCKARQPLILSDQELPAFKETHELEILYQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHH
LSWNYLCADG
HHCCHHCCCC
>Mature Secondary Structure
MFISQLKDKLASYDRYKENRINGLKAVFVLELMIIFYFFSSIDNPYFYYFYAPITCFTVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
AVGTTLKEKYLLLLYTLLGSILSIFLFGIISVYNVLFIFFVFFYTLALYFLVLHHFKKML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVPLMLSLASYSLIYGVEADSNFYIAINNALYTLAAMAVIFAGLFIFPKKYYFDIWERA
HHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLEVITGLESLSAKICKGEVKTIAIFSGIIVMERYSKMLPRNIKCYSILKITILSFELIL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TMSYLLSFQKQLRKEYVIVLHHYLERLCQSCKARQPLILSDQELPAFKETHELEILYQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHH
LSWNYLCADG
HHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA