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The map label for this gene is rpmH [H]

Identifier: 54027647

GI number: 54027647

Start: 6020480

End: 6020623

Strand: Reverse

Name: rpmH [H]

Synonym: nfa56730

Alternate gene names: 54027647

Gene position: 6020623-6020480 (Counterclockwise)

Preceding gene: NA

Following gene: 54027646

Centisome position: 99.99

GC content: 71.53

Gene sequence:

>144_bases
GTGGCCAAGGGCAAGCGGACGTTCCAGCCGAACAACCGTCGTCGGGCGCGCGTTCACGGCTTCCGTCTCCGGATGCGCAC
CCGTGCCGGTCGCGCCATCGTCTCGGCGCGCCGCCGTAAGGGCCGCGCTACCCTCACTGCCTGA

Upstream 100 bases:

>100_bases
CTGACCGCGTCCGGTCGTCACCGACCGCTGTGCGCCAGGGACGTATCACCGAACAGCTTCGGGTACCGAACGGTGCCCAC
CTACTCGAGGAGTGTTGACC

Downstream 100 bases:

>100_bases
TCCTCGCCCTCGGACGCTCGGGTGTTGCCTGAGCCGTATCGGTTGCATCATCGTGCCGACTTCTCCCGGACGGTGCGCCG
CGGCCAGCGAATCGGGAGGC

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA

Sequences:

>Translated_47_residues
MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA
>Mature_46_residues
AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101 [H]

Pfam domain/function: PF00468 Ribosomal_L34 [H]

EC number: NA

Molecular weight: Translated: 5492; Mature: 5360

Theoretical pI: Translated: 13.62; Mature: 13.62

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA
CCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA
CCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]