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The map label for this gene is 54027499

Identifier: 54027499

GI number: 54027499

Start: 5852440

End: 5853264

Strand: Reverse

Name: 54027499

Synonym: nfa55250

Alternate gene names: NA

Gene position: 5853264-5852440 (Counterclockwise)

Preceding gene: 54027500

Following gene: 54027497

Centisome position: 97.21

GC content: 71.76

Gene sequence:

>825_bases
ATGGTGGAGAGACGACAGCTGCTGTCGATGATCGCGGCGGGCACTGCCCTGTTGCTGACTGGTTGCACCGCGGCGAGTGA
GGCCGCCGACAGTGCCGTCGACGCCGCCGCGCCCCCCGTGCCGCCCGCGCCCCCCGTGCCGCCCGCGCCCCCCGAGCCGT
CGGCCCCGCTGCTGCCGCCCCCGCCGGGCGGCCCGCGCACGCCCATCGGCCGCACCACCATCACCGCGCTGCCCGGCCCC
GGCACCAACCTCGCCCTCACCGTGGACGACGGTGCCAGCCCCGAGGTGGTGGGCGCCTACCTCCGGTTCGCCCGCGACAC
CGGCGCCCGCTTCACCTTCTTCGTCACCGCGCACTACGAGTCGTGGACCATCCACCGTGCCGAACTGGCGCCGCTGGTGG
AATCCGGGCAGATCCAGCTCGCCAACCACACCTGGAGCCACGCCGACCTCACCGCCGTCTCGCGGACGGCCGTCGCCGAG
GAACTGTCGCGCGCACAATCGTTCCTGCGCAACACCTTCGGCGTGGACGGCACGCCCTACTACCGGCCACCCTTCGGCAG
GCACAACGCCGCCGTCGACGCGGTCGCCGCCGATCTCGGCTACACCGTGCCGACCATGTGGTACGGCTCGCTGTCGGACT
CCGGCCTGATCACCGAGCAGTTCCTCGTCGAATGCGCGCACCGCTGGTTCAACCCGCAGGCCATCGTCATCGGCCACGCC
AACGCGCCCACCGTCACGAAATGCTACGGGCAGCTCGTGGACATCATCCGCGCGCGCAACCTGTCGATGGTCACGCTGAA
CGACGTCCTGGAACCGCCCGCGTAA

Upstream 100 bases:

>100_bases
TGGTTGCGCGAAATCCGCCACCGGCTCACCTATCATCCGTACCGTGCCGCGGGACCGGTTTTGAACCCCGGCGCGCCGGC
GGCGAGCATGCGAGGTGGGG

Downstream 100 bases:

>100_bases
ACGGGAGCACCGGGGCGGCCTGCGTGGTGATGCTGCGCTGCCGCCTCCGGCCGCTGACCCGCTCAGGCGGTGCCGAACCC
GAACCCCCGGTCAGGCGACG

Product: putative polysaccharide deacetylase

Products: NA

Alternate protein names: Deacetylase; Xylanase/Chitin Deacetylase; Oligosaccharide Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; Chitin Deacetylase

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MVERRQLLSMIAAGTALLLTGCTAASEAADSAVDAAAPPVPPAPPVPPAPPEPSAPLLPPPPGGPRTPIGRTTITALPGP
GTNLALTVDDGASPEVVGAYLRFARDTGARFTFFVTAHYESWTIHRAELAPLVESGQIQLANHTWSHADLTAVSRTAVAE
ELSRAQSFLRNTFGVDGTPYYRPPFGRHNAAVDAVAADLGYTVPTMWYGSLSDSGLITEQFLVECAHRWFNPQAIVIGHA
NAPTVTKCYGQLVDIIRARNLSMVTLNDVLEPPA

Sequences:

>Translated_274_residues
MVERRQLLSMIAAGTALLLTGCTAASEAADSAVDAAAPPVPPAPPVPPAPPEPSAPLLPPPPGGPRTPIGRTTITALPGP
GTNLALTVDDGASPEVVGAYLRFARDTGARFTFFVTAHYESWTIHRAELAPLVESGQIQLANHTWSHADLTAVSRTAVAE
ELSRAQSFLRNTFGVDGTPYYRPPFGRHNAAVDAVAADLGYTVPTMWYGSLSDSGLITEQFLVECAHRWFNPQAIVIGHA
NAPTVTKCYGQLVDIIRARNLSMVTLNDVLEPPA
>Mature_274_residues
MVERRQLLSMIAAGTALLLTGCTAASEAADSAVDAAAPPVPPAPPVPPAPPEPSAPLLPPPPGGPRTPIGRTTITALPGP
GTNLALTVDDGASPEVVGAYLRFARDTGARFTFFVTAHYESWTIHRAELAPLVESGQIQLANHTWSHADLTAVSRTAVAE
ELSRAQSFLRNTFGVDGTPYYRPPFGRHNAAVDAVAADLGYTVPTMWYGSLSDSGLITEQFLVECAHRWFNPQAIVIGHA
NAPTVTKCYGQLVDIIRARNLSMVTLNDVLEPPA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29007; Mature: 29007

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERRQLLSMIAAGTALLLTGCTAASEAADSAVDAAAPPVPPAPPVPPAPPEPSAPLLPP
CCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PPGGPRTPIGRTTITALPGPGTNLALTVDDGASPEVVGAYLRFARDTGARFTFFVTAHYE
CCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEECC
SWTIHRAELAPLVESGQIQLANHTWSHADLTAVSRTAVAEELSRAQSFLRNTFGVDGTPY
CEEEEHHHHCCHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YRPPFGRHNAAVDAVAADLGYTVPTMWYGSLSDSGLITEQFLVECAHRWFNPQAIVIGHA
CCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
NAPTVTKCYGQLVDIIRARNLSMVTLNDVLEPPA
CCCHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCC
>Mature Secondary Structure
MVERRQLLSMIAAGTALLLTGCTAASEAADSAVDAAAPPVPPAPPVPPAPPEPSAPLLPP
CCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PPGGPRTPIGRTTITALPGPGTNLALTVDDGASPEVVGAYLRFARDTGARFTFFVTAHYE
CCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEECC
SWTIHRAELAPLVESGQIQLANHTWSHADLTAVSRTAVAEELSRAQSFLRNTFGVDGTPY
CEEEEHHHHCCHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YRPPFGRHNAAVDAVAADLGYTVPTMWYGSLSDSGLITEQFLVECAHRWFNPQAIVIGHA
CCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
NAPTVTKCYGQLVDIIRARNLSMVTLNDVLEPPA
CCCHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA