| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is glxK [H]
Identifier: 54027481
GI number: 54027481
Start: 5835138
End: 5836256
Strand: Reverse
Name: glxK [H]
Synonym: nfa55070
Alternate gene names: 54027481
Gene position: 5836256-5835138 (Counterclockwise)
Preceding gene: 54027482
Following gene: 54027479
Centisome position: 96.93
GC content: 76.14
Gene sequence:
>1119_bases ATGACCGCCGTGCCCCGGGTGCTGCTCGCCCCGGACAAGTTCAAGGGCTCGCTGACCGCGCCCGCGGTGGCCGACGCCCT CGCCCGCGGCATCCTCGCGGTCGCACCCGCGGCCGATCTGCGCCGGGTGCCGGTGGCCGACGGCGGGGACGGCACCGTGG ACGCGTTCGTCGCCGCGGGGTGGCGGCGGGTGCGGTTGACCGCGCCCGGGCCCACCGGGCAGCCCACCGACGCGTGTTAC GCCGTGCGCGGGGACACGGCGGTGGTGGAACTGGCCGCGGTGGTCGGGCTGACGAAGCTGCCCGCGCGACAACCTGATCC GCTGGGTGCGAGCACCTTCGGTCTCGGGGTGGTGATCGCCGATGCGGTGGCGGCCGGTGCCCGCGAGATCGTGCTCGGTC TCGGCGGCAGTGCGTCGAGCGACGGCGGCGCGGGGATGCTCCGGGCGCTGGGCGCGCGGATCCTGGACGCGGACGGGCGT GCGGTGGGCCGGGGCGGTGCGGCGCTGGCCGCGGCGGCGCGGTTCGATCCCGCCGAGCTGCCCGGCAGGCTGGCCGGGGT GCGGTTCACCCTCGCCTGCGACGTCGACAATCCGCTGCTGGGTGCCAACGGCGCGGTGCGGGTCTACGGCCCGCAGAAGG GTGCCGGCGTCGGTGATCGAGCGATTCTCGAAGCGGCACTGGCGAATTGGGCACAGGTGGTCGATCCGTCCGGTGCGGGC CTGCCCGGCGCGGGGGCGGCGGGCGGCACGGGTTTCGCGGCCATGACGGTGCTCGGCGCCCGGTTCCGCAGCGGTATCGA GGTGATCCTGGAACTGCTGGGGTTACCGGCGCTGCTGCCGGGCGCGGGCCTGGTGATCACCGGGGAGGGTTCGCTGGACG AACAGAGCCTGCACGGGAAGGCACCGATCGGGGTGGCGGACGCGGCCGGGGCGGCGGGCGTGCCCGTGGTCGCCGCCGTC GGCCGGGCGCTCCTGCCCGCCGATCGCCTGCGCGCCGCCGGTTTCACCGCCTGCTACGCGCTCACCGACCTGGAGCCGGA CCAGCGGCGCTGTGTCGAACAGGCGGCCGCGCTGCTGGAACGCCTCGGGGCGCGAATCGCCGCGGATCACCTGCGCTGA
Upstream 100 bases:
>100_bases CGCACCGGTGAGGTCAACGCGACCGTGCTCCCCGAGGCACCGCTGCCCGGCTGAGCCGCCCGCCTCGGCGAAATTCCCCC CGGCGGTCGAGAATGGCTTG
Downstream 100 bases:
>100_bases GCCCGAATACGTGACGCCGCCGGGCACGCGCCGCCGCCGAGTACCCCACGCCGCTGTACTCGGCGGCAGGCGGGGTTCAG CAGCTGGCGGCGAGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTAVPRVLLAPDKFKGSLTAPAVADALARGILAVAPAADLRRVPVADGGDGTVDAFVAAGWRRVRLTAPGPTGQPTDACY AVRGDTAVVELAAVVGLTKLPARQPDPLGASTFGLGVVIADAVAAGAREIVLGLGGSASSDGGAGMLRALGARILDADGR AVGRGGAALAAAARFDPAELPGRLAGVRFTLACDVDNPLLGANGAVRVYGPQKGAGVGDRAILEAALANWAQVVDPSGAG LPGAGAAGGTGFAAMTVLGARFRSGIEVILELLGLPALLPGAGLVITGEGSLDEQSLHGKAPIGVADAAGAAGVPVVAAV GRALLPADRLRAAGFTACYALTDLEPDQRRCVEQAAALLERLGARIAADHLR
Sequences:
>Translated_372_residues MTAVPRVLLAPDKFKGSLTAPAVADALARGILAVAPAADLRRVPVADGGDGTVDAFVAAGWRRVRLTAPGPTGQPTDACY AVRGDTAVVELAAVVGLTKLPARQPDPLGASTFGLGVVIADAVAAGAREIVLGLGGSASSDGGAGMLRALGARILDADGR AVGRGGAALAAAARFDPAELPGRLAGVRFTLACDVDNPLLGANGAVRVYGPQKGAGVGDRAILEAALANWAQVVDPSGAG LPGAGAAGGTGFAAMTVLGARFRSGIEVILELLGLPALLPGAGLVITGEGSLDEQSLHGKAPIGVADAAGAAGVPVVAAV GRALLPADRLRAAGFTACYALTDLEPDQRRCVEQAAALLERLGARIAADHLR >Mature_371_residues TAVPRVLLAPDKFKGSLTAPAVADALARGILAVAPAADLRRVPVADGGDGTVDAFVAAGWRRVRLTAPGPTGQPTDACYA VRGDTAVVELAAVVGLTKLPARQPDPLGASTFGLGVVIADAVAAGAREIVLGLGGSASSDGGAGMLRALGARILDADGRA VGRGGAALAAAARFDPAELPGRLAGVRFTLACDVDNPLLGANGAVRVYGPQKGAGVGDRAILEAALANWAQVVDPSGAGL PGAGAAGGTGFAAMTVLGARFRSGIEVILELLGLPALLPGAGLVITGEGSLDEQSLHGKAPIGVADAAGAAGVPVVAAVG RALLPADRLRAAGFTACYALTDLEPDQRRCVEQAAALLERLGARIAADHLR
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=345, Percent_Identity=42.0289855072464, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI1786724, Length=323, Percent_Identity=45.5108359133127, Blast_Score=222, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 36725; Mature: 36593
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVPRVLLAPDKFKGSLTAPAVADALARGILAVAPAADLRRVPVADGGDGTVDAFVAAG CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHEEECCCHHHCCCCCCCCCCCHHHHHHHCC WRRVRLTAPGPTGQPTDACYAVRGDTAVVELAAVVGLTKLPARQPDPLGASTFGLGVVIA CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH DAVAAGAREIVLGLGGSASSDGGAGMLRALGARILDADGRAVGRGGAALAAAARFDPAEL HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCEECCCCHHHHHHHCCCHHHC PGRLAGVRFTLACDVDNPLLGANGAVRVYGPQKGAGVGDRAILEAALANWAQVVDPSGAG CCCEECEEEEEEECCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC LPGAGAAGGTGFAAMTVLGARFRSGIEVILELLGLPALLPGAGLVITGEGSLDEQSLHGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHCCCC APIGVADAAGAAGVPVVAAVGRALLPADRLRAAGFTACYALTDLEPDQRRCVEQAAALLE CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHH RLGARIAADHLR HHHHHHHHHHCC >Mature Secondary Structure TAVPRVLLAPDKFKGSLTAPAVADALARGILAVAPAADLRRVPVADGGDGTVDAFVAAG CCCCCEEECCCCCCCCCCCHHHHHHHHHHHEEECCCHHHCCCCCCCCCCCHHHHHHHCC WRRVRLTAPGPTGQPTDACYAVRGDTAVVELAAVVGLTKLPARQPDPLGASTFGLGVVIA CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH DAVAAGAREIVLGLGGSASSDGGAGMLRALGARILDADGRAVGRGGAALAAAARFDPAEL HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCEECCCCHHHHHHHCCCHHHC PGRLAGVRFTLACDVDNPLLGANGAVRVYGPQKGAGVGDRAILEAALANWAQVVDPSGAG CCCEECEEEEEEECCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC LPGAGAAGGTGFAAMTVLGARFRSGIEVILELLGLPALLPGAGLVITGEGSLDEQSLHGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHCCCC APIGVADAAGAAGVPVVAAVGRALLPADRLRAAGFTACYALTDLEPDQRRCVEQAAALLE CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHH RLGARIAADHLR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]