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The map label for this gene is 54027422

Identifier: 54027422

GI number: 54027422

Start: 5765570

End: 5766064

Strand: Reverse

Name: 54027422

Synonym: nfa54480

Alternate gene names: NA

Gene position: 5766064-5765570 (Counterclockwise)

Preceding gene: 54027424

Following gene: 54027419

Centisome position: 95.76

GC content: 70.51

Gene sequence:

>495_bases
ATGGTGCGGATCGGTGTCAGCGGGCACATGAACATCACCGAGCCCACTGCGGTGAAGGTCTACGACGCGGTGCGGGCGTT
GCTCGCCCAGCACGATCCGAACGAGGTGGTCGGGGTGTCGTGCCTGGCGAGGGGGGCCGACAGTGTTTTCGCGCGGGCGG
TGCTCGACGTGGGCGGGCGACTCGAGGTGGTGTTGCCCTCGCGCAACTACCGGGCCGTCAAGGTGAAGCCGGATCACGCG
GCGGAGTTCGACGCGTTGGTGGAGCGGGCCGCGCGGGTGCGCGTGATGGATTTCGACGACGCCGGGCGCGACGCCTACGA
AGCCGCGAACGAGGCGGTGCTGGGGAGTGTGGACCGTCTGGTGGCCGTGTGGGACGGTGCTGCCGGACAGTCCGGTGGTA
CCGCCTCGGTGGTCGAGTCGGCGCGGGCGCGCGGCCTGCCGGTGGATGTGATCTGGCCGGAGGGCGCCGCTCGCGCCGCA
GGCAAGAAGCAATAG

Upstream 100 bases:

>100_bases
GCCGTGTAGAACCGCATGCGAAGTTCCAGATATCCGGCCTCGGTGACCTGCGGGAGCGGATGCGGCCTCTGGTGGCGACG
GTGTGAGGAGGGGGTCGGGC

Downstream 100 bases:

>100_bases
CCCCTTACCGCCCGTCGAACTCCGGGAACCATTCCACCGGCGTCGTCTCCCGGACGAACACCAGCGCGTCGAACGCCTCG
GCCGGCGAGGGGACCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MVRIGVSGHMNITEPTAVKVYDAVRALLAQHDPNEVVGVSCLARGADSVFARAVLDVGGRLEVVLPSRNYRAVKVKPDHA
AEFDALVERAARVRVMDFDDAGRDAYEAANEAVLGSVDRLVAVWDGAAGQSGGTASVVESARARGLPVDVIWPEGAARAA
GKKQ

Sequences:

>Translated_164_residues
MVRIGVSGHMNITEPTAVKVYDAVRALLAQHDPNEVVGVSCLARGADSVFARAVLDVGGRLEVVLPSRNYRAVKVKPDHA
AEFDALVERAARVRVMDFDDAGRDAYEAANEAVLGSVDRLVAVWDGAAGQSGGTASVVESARARGLPVDVIWPEGAARAA
GKKQ
>Mature_164_residues
MVRIGVSGHMNITEPTAVKVYDAVRALLAQHDPNEVVGVSCLARGADSVFARAVLDVGGRLEVVLPSRNYRAVKVKPDHA
AEFDALVERAARVRVMDFDDAGRDAYEAANEAVLGSVDRLVAVWDGAAGQSGGTASVVESARARGLPVDVIWPEGAARAA
GKKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17261; Mature: 17261

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIGVSGHMNITEPTAVKVYDAVRALLAQHDPNEVVGVSCLARGADSVFARAVLDVGGR
CEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCE
LEVVLPSRNYRAVKVKPDHAAEFDALVERAARVRVMDFDDAGRDAYEAANEAVLGSVDRL
EEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHE
VAVWDGAAGQSGGTASVVESARARGLPVDVIWPEGAARAAGKKQ
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVRIGVSGHMNITEPTAVKVYDAVRALLAQHDPNEVVGVSCLARGADSVFARAVLDVGGR
CEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCE
LEVVLPSRNYRAVKVKPDHAAEFDALVERAARVRVMDFDDAGRDAYEAANEAVLGSVDRL
EEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHE
VAVWDGAAGQSGGTASVVESARARGLPVDVIWPEGAARAAGKKQ
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA