| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54027419
Identifier: 54027419
GI number: 54027419
Start: 5761288
End: 5762817
Strand: Reverse
Name: 54027419
Synonym: nfa54450
Alternate gene names: NA
Gene position: 5762817-5761288 (Counterclockwise)
Preceding gene: 54027422
Following gene: 54027418
Centisome position: 95.71
GC content: 73.53
Gene sequence:
>1530_bases ATGCTGCCAGCCGGAATGGACCCGCGGACGCCGGTGCTCGTCGGCGTCGGTCAGGTCGTGCACCGCAGCGGTGAACCGGG CCTGCCGGGCCCGGTGGAACTGGCCGCCGAAGCGCTGCGTCGCGCGGGCGCCGACAGCGGCGCGGGCGATCGGCTGGTGC GCGCGGCCGACGTGGTCGCCGCCGTCGCGCCGGTGAGCAAGCCCTACCCGGACCTGGCGGCGATGGTCGCCGGCGAACTC GGCGCGACGCCGAAACGCACGGCGCAGACCGCGCGTTTCGGCGGCGACGGCCCACAGCGGCTGGTCAACTGGGCCGCGCA GGCGATCGCCGACGGCCGCGCCGAGGTCGTGCTGATCGCGGGCGCGGAATCGGTAGCCGCCGCGAACGCCGCGAAACGCG CCGGGACCGTGCCGGACTGGCCGGACCAGCCCGCCGACGCCACGCCGGACGAGGTGCTCGGCTCGGACAAGGGCCCGAAC TCCGAGATGGAAACCGGGGCGGGACTGTGGGGGCCGATCTACTTCTACGCCCTGATAGAGAACGCCCTGCGTGGACGCCT CGGCCTGAGCGAGCCCGCCTACCTCGAGCGCATCGGCGGGCTGTGGTCACGATTCTCCGAGATCGCCGCCACCAACCCCT ACGCCTGGCTGCCCGAACGGCACAGCGTGCGCGGCCTGATCACGGCCACCCCGGACAACCGCATGGTGACCAGCCCCTAT CGAAAGCTGTTGGTCGCCAATCTCTCCGTCGACCAGGGCGCCGGGCTGATCCTGTGCAGTGCGGCGGCCGCCGATGCCGC GGGCGTGCCGCGCGAGCGCTGGGTCTTCCCGCACGGTGGCGCGACCGGCAACGAGGTGTGGTTCGTCAGCGAGCGCGCGG ACATGGCCGCCTCGCCCGCCATCGCCGCGGTCGGCGCGCAGGCGTTGTCCGACGCGGGCGTCGGCATCGACGACATCGCC CACATCGACCTGTACTCCTGCTTCCCGATCGCCGTGCAGGTGGGCGCCGAAGCCCTCGGCCTGCCGCTCGACGACCCGAG CCGCCCGCTCTCGCTCACCGGCGGGCTCACCTTCGGGGGCGGCCCGGGCAACAACTACACCACCCACGCCATCGCCGCCC TCGCCGAACGCCTTCGCGCCGAACCGGATTCATTCGGGCTCGCGACCGCGCTCGGCTGGTACGCCACCAAACACGGCGTC GGCGTGTATTCCACCCGCCCGCCCGCGCGGCTGTTCCGCGCCGTCGAGGTGCCCACCCCCGACGCCCACCGCGCGACCGC GCCCGGCTACACCGGCCCCGCCACCGTCGAGTCCTACACCGTCCCCTACCGCAAGGGTCCGGCCCCCGAACGCGCCGACG AGCCCGAGGCCGTGGTGGTCAGCGCGCTGAACCCGGCCGGGGCTCGCACCCTGGTGCGGGTGAGCGACCCCGGAATCATC GCCGCGTTCACCGAAACCGACCCGCTCGGCGCGAAGATCGATATCGTCGCCGCGGACCGGATCACCCTGTCGGAAAGGAC TGCCCGATGA
Upstream 100 bases:
>100_bases AGGCCGGTCGTGCCCTGCGATTGTGCTACGGGATGGCCTCTGCTGTAATCGGAATCGAAGTAACCGTCAAAGATGACGGT ATTTCGCGAGCGGAGGAACA
Downstream 100 bases:
>100_bases GCGACACCCTGCGGGTCGAGCGCCGCGAGGCGGTCACCGTGCTCACCGTCGACCGTCCACGGGCGCGCAACGCCATCGAC CTGGCGACCGCGCAGGCCAT
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetyl-Co A Synthetase; Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase; Thiolase; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MLPAGMDPRTPVLVGVGQVVHRSGEPGLPGPVELAAEALRRAGADSGAGDRLVRAADVVAAVAPVSKPYPDLAAMVAGEL GATPKRTAQTARFGGDGPQRLVNWAAQAIADGRAEVVLIAGAESVAAANAAKRAGTVPDWPDQPADATPDEVLGSDKGPN SEMETGAGLWGPIYFYALIENALRGRLGLSEPAYLERIGGLWSRFSEIAATNPYAWLPERHSVRGLITATPDNRMVTSPY RKLLVANLSVDQGAGLILCSAAAADAAGVPRERWVFPHGGATGNEVWFVSERADMAASPAIAAVGAQALSDAGVGIDDIA HIDLYSCFPIAVQVGAEALGLPLDDPSRPLSLTGGLTFGGGPGNNYTTHAIAALAERLRAEPDSFGLATALGWYATKHGV GVYSTRPPARLFRAVEVPTPDAHRATAPGYTGPATVESYTVPYRKGPAPERADEPEAVVVSALNPAGARTLVRVSDPGII AAFTETDPLGAKIDIVAADRITLSERTAR
Sequences:
>Translated_509_residues MLPAGMDPRTPVLVGVGQVVHRSGEPGLPGPVELAAEALRRAGADSGAGDRLVRAADVVAAVAPVSKPYPDLAAMVAGEL GATPKRTAQTARFGGDGPQRLVNWAAQAIADGRAEVVLIAGAESVAAANAAKRAGTVPDWPDQPADATPDEVLGSDKGPN SEMETGAGLWGPIYFYALIENALRGRLGLSEPAYLERIGGLWSRFSEIAATNPYAWLPERHSVRGLITATPDNRMVTSPY RKLLVANLSVDQGAGLILCSAAAADAAGVPRERWVFPHGGATGNEVWFVSERADMAASPAIAAVGAQALSDAGVGIDDIA HIDLYSCFPIAVQVGAEALGLPLDDPSRPLSLTGGLTFGGGPGNNYTTHAIAALAERLRAEPDSFGLATALGWYATKHGV GVYSTRPPARLFRAVEVPTPDAHRATAPGYTGPATVESYTVPYRKGPAPERADEPEAVVVSALNPAGARTLVRVSDPGII AAFTETDPLGAKIDIVAADRITLSERTAR >Mature_509_residues MLPAGMDPRTPVLVGVGQVVHRSGEPGLPGPVELAAEALRRAGADSGAGDRLVRAADVVAAVAPVSKPYPDLAAMVAGEL GATPKRTAQTARFGGDGPQRLVNWAAQAIADGRAEVVLIAGAESVAAANAAKRAGTVPDWPDQPADATPDEVLGSDKGPN SEMETGAGLWGPIYFYALIENALRGRLGLSEPAYLERIGGLWSRFSEIAATNPYAWLPERHSVRGLITATPDNRMVTSPY RKLLVANLSVDQGAGLILCSAAAADAAGVPRERWVFPHGGATGNEVWFVSERADMAASPAIAAVGAQALSDAGVGIDDIA HIDLYSCFPIAVQVGAEALGLPLDDPSRPLSLTGGLTFGGGPGNNYTTHAIAALAERLRAEPDSFGLATALGWYATKHGV GVYSTRPPARLFRAVEVPTPDAHRATAPGYTGPATVESYTVPYRKGPAPERADEPEAVVVSALNPAGARTLVRVSDPGII AAFTETDPLGAKIDIVAADRITLSERTAR
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52662; Mature: 52662
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAGMDPRTPVLVGVGQVVHRSGEPGLPGPVELAAEALRRAGADSGAGDRLVRAADVVA CCCCCCCCCCCEEEECHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AVAPVSKPYPDLAAMVAGELGATPKRTAQTARFGGDGPQRLVNWAAQAIADGRAEVVLIA HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEE GAESVAAANAAKRAGTVPDWPDQPADATPDEVLGSDKGPNSEMETGAGLWGPIYFYALIE CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHH NALRGRLGLSEPAYLERIGGLWSRFSEIAATNPYAWLPERHSVRGLITATPDNRMVTSPY HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCEEHHHH RKLLVANLSVDQGAGLILCSAAAADAAGVPRERWVFPHGGATGNEVWFVSERADMAASPA HHHEEEECCCCCCCCEEEEECCCCCCCCCCHHHEECCCCCCCCCEEEEEECCCCCCCCCH IAAVGAQALSDAGVGIDDIAHIDLYSCFPIAVQVGAEALGLPLDDPSRPLSLTGGLTFGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEECCEEECC GPGNNYTTHAIAALAERLRAEPDSFGLATALGWYATKHGVGVYSTRPPARLFRAVEVPTP CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCC DAHRATAPGYTGPATVESYTVPYRKGPAPERADEPEAVVVSALNPAGARTLVRVSDPGII CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE AAFTETDPLGAKIDIVAADRITLSERTAR EEEECCCCCCCEEEEEEECCEECCCCCCC >Mature Secondary Structure MLPAGMDPRTPVLVGVGQVVHRSGEPGLPGPVELAAEALRRAGADSGAGDRLVRAADVVA CCCCCCCCCCCEEEECHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AVAPVSKPYPDLAAMVAGELGATPKRTAQTARFGGDGPQRLVNWAAQAIADGRAEVVLIA HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEE GAESVAAANAAKRAGTVPDWPDQPADATPDEVLGSDKGPNSEMETGAGLWGPIYFYALIE CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHH NALRGRLGLSEPAYLERIGGLWSRFSEIAATNPYAWLPERHSVRGLITATPDNRMVTSPY HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCEEHHHH RKLLVANLSVDQGAGLILCSAAAADAAGVPRERWVFPHGGATGNEVWFVSERADMAASPA HHHEEEECCCCCCCCEEEEECCCCCCCCCCHHHEECCCCCCCCCEEEEEECCCCCCCCCH IAAVGAQALSDAGVGIDDIAHIDLYSCFPIAVQVGAEALGLPLDDPSRPLSLTGGLTFGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEECCEEECC GPGNNYTTHAIAALAERLRAEPDSFGLATALGWYATKHGVGVYSTRPPARLFRAVEVPTP CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCC DAHRATAPGYTGPATVESYTVPYRKGPAPERADEPEAVVVSALNPAGARTLVRVSDPGII CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE AAFTETDPLGAKIDIVAADRITLSERTAR EEEECCCCCCCEEEEEEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA